Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528199

Identifier: 188528199

GI number: 188528199

Start: 1426844

End: 1427116

Strand: Direct

Name: 188528199

Synonym: HPSH_07315

Alternate gene names: NA

Gene position: 1426844-1427116 (Clockwise)

Preceding gene: 188528195

Following gene: 188528201

Centisome position: 88.7

GC content: 38.83

Gene sequence:

>273_bases
ATGGCGTGTAAATTTTGCCCTAAGATCAGAAAAACAGATTGGATTTTTATTTTAATCGCTGCTTTAGGCTTTTATGCAGT
CAATAAACTAGGGTATGCGCCCAAATTCAATACCCCCACTTCAAAGCTTTCACACTCTCTTTCACGCCCTCTTCCACACC
CTATTGAAAAGCCTAACAATATGACCGAAGAAGAAAGGAAAAAGCGCTTCATAAAGTTGCAAAAAGCATGCTTACTCCAT
AAAGACAAAAAGGCATGCGAAGAGGTTTTTTAG

Upstream 100 bases:

>100_bases
CTTAAAGATTTTTTGAATGAGACTCCACATGCGGTTTTCCTAGACTTAAAAATTTGACCATAAGAGTGTATTATACTTCA
AATGTTTTAAGGATTAAATC

Downstream 100 bases:

>100_bases
ATTGCATTTGTTGTTTTTGTGCTTTTTAAGATCATTGCAAATTTTATACGCTCTTTTTGTTTGTAAAAAGGCTTTTTTTA
GCGGTGATTTTTAGCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MACKFCPKIRKTDWIFILIAALGFYAVNKLGYAPKFNTPTSKLSHSLSRPLPHPIEKPNNMTEEERKKRFIKLQKACLLH
KDKKACEEVF

Sequences:

>Translated_90_residues
MACKFCPKIRKTDWIFILIAALGFYAVNKLGYAPKFNTPTSKLSHSLSRPLPHPIEKPNNMTEEERKKRFIKLQKACLLH
KDKKACEEVF
>Mature_89_residues
ACKFCPKIRKTDWIFILIAALGFYAVNKLGYAPKFNTPTSKLSHSLSRPLPHPIEKPNNMTEEERKKRFIKLQKACLLHK
DKKACEEVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10449; Mature: 10317

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACKFCPKIRKTDWIFILIAALGFYAVNKLGYAPKFNTPTSKLSHSLSRPLPHPIEKPNN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
MTEEERKKRFIKLQKACLLHKDKKACEEVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ACKFCPKIRKTDWIFILIAALGFYAVNKLGYAPKFNTPTSKLSHSLSRPLPHPIEKPNN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
MTEEERKKRFIKLQKACLLHKDKKACEEVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA