| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is murB
Identifier: 188528183
GI number: 188528183
Start: 1410160
End: 1410939
Strand: Reverse
Name: murB
Synonym: HPSH_07235
Alternate gene names: 188528183
Gene position: 1410939-1410160 (Counterclockwise)
Preceding gene: 188528184
Following gene: 188528179
Centisome position: 87.72
GC content: 40.64
Gene sequence:
>780_bases ATGCTAGAAACCATTATTGATTTTTCTCGTTACAGCAGCGTGAAAATCGGTGCGCCTTTGAAAGTGAGCGTTTTAGAAAA CGATAATGAAATTTCTCAAGAACACCAGATTATAGGTTTAGCGAACAACCTTTTAATCGCTCCTGGCGCGAAAAATCTCG CTTTATTGGGCAAGAATTACGATTACATTTGCGATAAGGGTGAGTGGGTGGAGGTAGGGGGAGCGGCCAACTCGTCTAAA ATTTTTAATTATTTTAGGGCGAATGATTTAGGGGGTTTGGAGTTTTTAGGGCAATTGCCTGGCACTTTGGGGGCGTTAGT TAAAATGAATGCTGGCATGAAAGAATTTGAAATAAAAAATATTTTAGAAAGCGCTTGTGTTAATAACCAATGGCTAGAAA ATGAAGCGCTAGGGTTAGATTATCGCAGCAGCCAATTTAATGGCGTTGTTTTAAAAGCGAGGTTTAAAAAAACGCATGGC TTTAGAGAAGAGGTTTTAAAAGCGTGTAAAAGCATGCGCAAAAGCCACCCCAAATTGCCTAATTTTGGGAGCTGTTTCAA AAACCCGCCTAACGATTATGCAGGCAGGCTTTTAGAGGGCGTGGGCTTAAGGGGGTATCGCTTAAAAAGAGTGGGCTTTG CCAAAGAGCATGCGAATTTTTTGGTGAATTTGGGGGGTGCAGAATTTGAAGAAGCGTTGGAATTAATAGAACTCGCCAAA ACCAGAGTGTTACAAGAATACGGCATTCATTTAGAAGAAGAAGTGAAGATTTTAAGGTAG
Upstream 100 bases:
>100_bases GATTGGGGTGCTGATTTTAACCATGCCGTGGATGACTAACATGCTTTTAGACTACACCAAAACCTTAATCAAGCTCATTC CTAAAATCATAGGCTAGAAA
Downstream 100 bases:
>100_bases GGTTGGAAAGCTTTATTTGAGATTAAGCTTACCCCTAATTATTATTTCGTCTTATCATAATCCATGCTGTTATCACAAAC GATCCTTTTTCTTTGGGCGT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLETIIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPGAKNLALLGKNYDYICDKGEWVEVGGAANSSK IFNYFRANDLGGLEFLGQLPGTLGALVKMNAGMKEFEIKNILESACVNNQWLENEALGLDYRSSQFNGVVLKARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDYAGRLLEGVGLRGYRLKRVGFAKEHANFLVNLGGAEFEEALELIELAK TRVLQEYGIHLEEEVKILR
Sequences:
>Translated_259_residues MLETIIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPGAKNLALLGKNYDYICDKGEWVEVGGAANSSK IFNYFRANDLGGLEFLGQLPGTLGALVKMNAGMKEFEIKNILESACVNNQWLENEALGLDYRSSQFNGVVLKARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDYAGRLLEGVGLRGYRLKRVGFAKEHANFLVNLGGAEFEEALELIELAK TRVLQEYGIHLEEEVKILR >Mature_259_residues MLETIIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPGAKNLALLGKNYDYICDKGEWVEVGGAANSSK IFNYFRANDLGGLEFLGQLPGTLGALVKMNAGMKEFEIKNILESACVNNQWLENEALGLDYRSSQFNGVVLKARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDYAGRLLEGVGLRGYRLKRVGFAKEHANFLVNLGGAEFEEALELIELAK TRVLQEYGIHLEEEVKILR
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the murB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR003170 - InterPro: IPR011601 [H]
Pfam domain/function: PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 28866; Mature: 28866
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETIIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPGAKNLALLGKNY CCCHHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHEEEEECCEEECCCCCCEEEECCCC DYICDKGEWVEVGGAANSSKIFNYFRANDLGGLEFLGQLPGTLGALVKMNAGMKEFEIKN CEEECCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHH ILESACVNNQWLENEALGLDYRSSQFNGVVLKARFKKTHGFREEVLKACKSMRKSHPKLP HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCC NFGSCFKNPPNDYAGRLLEGVGLRGYRLKRVGFAKEHANFLVNLGGAEFEEALELIELAK CCCHHHCCCCHHHHHHHHHHCCCCCEEEHHCCCHHHHCCEEEECCCCCHHHHHHHHHHHH TRVLQEYGIHLEEEVKILR HHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MLETIIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPGAKNLALLGKNY CCCHHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHEEEEECCEEECCCCCCEEEECCCC DYICDKGEWVEVGGAANSSKIFNYFRANDLGGLEFLGQLPGTLGALVKMNAGMKEFEIKN CEEECCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHH ILESACVNNQWLENEALGLDYRSSQFNGVVLKARFKKTHGFREEVLKACKSMRKSHPKLP HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCC NFGSCFKNPPNDYAGRLLEGVGLRGYRLKRVGFAKEHANFLVNLGGAEFEEALELIELAK CCCHHHCCCCHHHHHHHHHHCCCCCEEEHHCCCHHHHCCEEEECCCCCHHHHHHHHHHHH TRVLQEYGIHLEEEVKILR HHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]