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The map label for this gene is fliQ

Identifier: 188528184

GI number: 188528184

Start: 1410943

End: 1411194

Strand: Reverse

Name: fliQ

Synonym: HPSH_07240

Alternate gene names: 188528184

Gene position: 1411194-1410943 (Counterclockwise)

Preceding gene: 188528185

Following gene: 188528183

Centisome position: 87.73

GC content: 38.49

Gene sequence:

>252_bases
ATGAAACTCGCCATTGAAACTTATAAAATCACTTTGATGATTTCTTTACCGGTATTACTAGCGGGTTTAGTGGTGGGGCT
ATTAGTCAGCATTTTTCAAGCGACCACTCAAATCAATGAAATGACTTTGTCTTTTGTGCCTAAGATTTTAGCCGTGATTG
GGGTGCTGATTTTAACCATGCCGTGGATGACTAACATGCTTTTAGACTACACCAAAACCTTAATCAAGCTCATTCCTAAA
ATCATAGGCTAG

Upstream 100 bases:

>100_bases
TTTTTAGCGCAAGATGAAAACGCTTTACAGCCTTTTGAAACAAGCTTTCAGCAATTAGAAGAAATCTTAAGATAAAAGGA
ATATCATGGAATCACAGCTC

Downstream 100 bases:

>100_bases
AAAATGCTAGAAACCATTATTGATTTTTCTCGTTACAGCAGCGTGAAAATCGGTGCGCCTTTGAAAGTGAGCGTTTTAGA
AAACGATAATGAAATTTCTC

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTKTLIKLIPK
IIG

Sequences:

>Translated_83_residues
MKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTKTLIKLIPK
IIG
>Mature_83_residues
MKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTKTLIKLIPK
IIG

Specific function: Role in flagellar biosynthesis

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family

Homologues:

Organism=Escherichia coli, GI1788260, Length=58, Percent_Identity=62.0689655172414, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIQ_HELPJ (P0A0S4)

Other databases:

- EMBL:   AE001439
- PIR:   C64697
- RefSeq:   NP_224032.1
- STRING:   P0A0S4
- GeneID:   889895
- GenomeReviews:   AE001439_GR
- KEGG:   hpj:jhp1314
- eggNOG:   COG1987
- HOGENOM:   HBG729002
- OMA:   INEMTLT
- ProtClustDB:   PRK05700
- BioCyc:   HPYL85963:JHP1314-MONOMER
- InterPro:   IPR002191
- InterPro:   IPR006305
- PRINTS:   PR00952
- TIGRFAMs:   TIGR01402

Pfam domain/function: PF01313 Bac_export_3

EC number: NA

Molecular weight: Translated: 9174; Mature: 9174

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2105c310)-; HASH(0x2251ec50)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PWMTNMLLDYTKTLIKLIPKIIG
HHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PWMTNMLLDYTKTLIKLIPKIIG
HHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682