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The map label for this gene is ctpA [H]

Identifier: 188528138

GI number: 188528138

Start: 1354562

End: 1355926

Strand: Reverse

Name: ctpA [H]

Synonym: HPSH_06985

Alternate gene names: 188528138

Gene position: 1355926-1354562 (Counterclockwise)

Preceding gene: 188528139

Following gene: 188528137

Centisome position: 84.3

GC content: 42.56

Gene sequence:

>1365_bases
ATGACAAAACGACTTTTTAAAGGGTTGTTAGCGATTTCTCTTGCTGTGAGTTTGCATGGTGGTGAAGTTAAGGAAAAAAA
GCCGGTCAAGCCGGTTAAAGAAGATCCGCAAGAATTAGCGGCTAAAAGGGTGGAAGCGTTCAATCGTTTCACTAATGTGG
TTACAGAAATTGAAAAAAAATATGTGGATAAAATCACCATTTCTGAGATCATGACTAAAGCGATTGAAGGCTTGCTCTCT
AATTTGGACGCGCATTCAGCGTATTTGAATGAAAAGAAGTTTAAGGAATTTCAAGCCCAAACCGAAGGCGAATTTGGAGG
GCTTGGGATCACGGTGGGCATGCGCGATGGCGTTTTAACCGTGATCGCTCCTTTAGAAGGCACTCCAGCTTACAAGGCTG
GGGTTAAAGCGGGCGACAACATTTTAAAAATCAACAACGAAAGCACGCTGAGCATGAGCATTGATGATGCGATCAATCTC
ATGCGCGGCAAGCCAAAGACCCCTATCCAGATCACCATTGTGAGAAAAAACGAGCCAAAACCCTTGGTGTTTAATATTGT
TAGAGACATCATCAAAATCCCCTCTGTCTCTGTGAAAAAGATTAAAGACACCCCTTATTTGTATGTGAGAGTGAGTAGTT
TTGACAAGAATGTTACCAAATCGGTTTTAGACGGCTTAAAAGCTAACCCTAAGACTAAGGGGATCGTGTTGGATTTAAGA
GGCAATCCTGGAGGGCTGTTAAACCAAGCGGTGGGTTTGTCTAACCTCTTCGTTAAAGAGGGGATTTTAGTCTCTCAAAA
AGGCAAAAATAAGGAGGAAAATTTAGAATACAAGGCTAATGGCAGAGCCCCTTATACCAATTTGCCTATTGCGGTGTTAG
TCAATGGCGGTTCAGCGAGCGCGAGCGAGATCGTAGCAGGGGCTTTGCAAGATCACAAACGAGCCATCATTATCGGTGAA
AAAACCTTTGGTAAGGGAAGCGTGCAGATGCTGCTCCCTGTCAATAAAGACGAAGCCATTAAAATCACAACCGCGCGCTA
CTATTTGCCGAGCGGGCGCACCATTCAAGCTAAGGGGATCACGCCTGATATTGTGATCTATCCTGGTAAAGCGCCAGAAA
ATGAGAATAAATTCAGCTTGAAAGAAGCGGATCTAAAACACCATTTAGAGCAAGAGCTTAAAAAGATTGATGATAAAACC
CCTAATTCCAAAGAGGCGGATAAAGACAAGAAAAACGAAGAGGAAAAAGAGGTTACCCCTAAAATGATCAACGATGATAT
TCAACTAAAAACCGCTATTGACAGCTTGAAAACCTGGTCTATCGTGGATGATAAAATGGATGAAAAAACGCCTAAGAAGA
AATAA

Upstream 100 bases:

>100_bases
GGGCATGTTATCTAAATTTTAGATAGAATAAACGCAAAAAATTGAATAAAACCTTAAAGGTGATTCTTTCTAATCTCAAA
AATGGGTGGTGCTATTAACA

Downstream 100 bases:

>100_bases
AAACTCATGGGGTTTTTATTTGAAAAATCGTTAATGGGTTTTTGCATTCATTCAATCAAAATCGTTAAAACCATCGGTTT
GATTTTAAGCCTTTTAGCCA

Product: protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MTKRLFKGLLAISLAVSLHGGEVKEKKPVKPVKEDPQELAAKRVEAFNRFTNVVTEIEKKYVDKITISEIMTKAIEGLLS
NLDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDGVLTVIAPLEGTPAYKAGVKAGDNILKINNESTLSMSIDDAINL
MRGKPKTPIQITIVRKNEPKPLVFNIVRDIIKIPSVSVKKIKDTPYLYVRVSSFDKNVTKSVLDGLKANPKTKGIVLDLR
GNPGGLLNQAVGLSNLFVKEGILVSQKGKNKEENLEYKANGRAPYTNLPIAVLVNGGSASASEIVAGALQDHKRAIIIGE
KTFGKGSVQMLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKAPENENKFSLKEADLKHHLEQELKKIDDKT
PNSKEADKDKKNEEEKEVTPKMINDDIQLKTAIDSLKTWSIVDDKMDEKTPKKK

Sequences:

>Translated_454_residues
MTKRLFKGLLAISLAVSLHGGEVKEKKPVKPVKEDPQELAAKRVEAFNRFTNVVTEIEKKYVDKITISEIMTKAIEGLLS
NLDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDGVLTVIAPLEGTPAYKAGVKAGDNILKINNESTLSMSIDDAINL
MRGKPKTPIQITIVRKNEPKPLVFNIVRDIIKIPSVSVKKIKDTPYLYVRVSSFDKNVTKSVLDGLKANPKTKGIVLDLR
GNPGGLLNQAVGLSNLFVKEGILVSQKGKNKEENLEYKANGRAPYTNLPIAVLVNGGSASASEIVAGALQDHKRAIIIGE
KTFGKGSVQMLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKAPENENKFSLKEADLKHHLEQELKKIDDKT
PNSKEADKDKKNEEEKEVTPKMINDDIQLKTAIDSLKTWSIVDDKMDEKTPKKK
>Mature_453_residues
TKRLFKGLLAISLAVSLHGGEVKEKKPVKPVKEDPQELAAKRVEAFNRFTNVVTEIEKKYVDKITISEIMTKAIEGLLSN
LDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDGVLTVIAPLEGTPAYKAGVKAGDNILKINNESTLSMSIDDAINLM
RGKPKTPIQITIVRKNEPKPLVFNIVRDIIKIPSVSVKKIKDTPYLYVRVSSFDKNVTKSVLDGLKANPKTKGIVLDLRG
NPGGLLNQAVGLSNLFVKEGILVSQKGKNKEENLEYKANGRAPYTNLPIAVLVNGGSASASEIVAGALQDHKRAIIIGEK
TFGKGSVQMLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKAPENENKFSLKEADLKHHLEQELKKIDDKTP
NSKEADKDKKNEEEKEVTPKMINDDIQLKTAIDSLKTWSIVDDKMDEKTPKKK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=331, Percent_Identity=28.0966767371601, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50006; Mature: 49874

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLFKGLLAISLAVSLHGGEVKEKKPVKPVKEDPQELAAKRVEAFNRFTNVVTEIEKK
CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVDKITISEIMTKAIEGLLSNLDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDGVLT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
VIAPLEGTPAYKAGVKAGDNILKINNESTLSMSIDDAINLMRGKPKTPIQITIVRKNEPK
EEECCCCCCCHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECCCCC
PLVFNIVRDIIKIPSVSVKKIKDTPYLYVRVSSFDKNVTKSVLDGLKANPKTKGIVLDLR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEC
GNPGGLLNQAVGLSNLFVKEGILVSQKGKNKEENLEYKANGRAPYTNLPIAVLVNGGSAS
CCCCHHHHHHHCHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAIIIGEKTFGKGSVQMLLPVNKDEAIKITTARYYLPSGRTIQAKGI
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCC
TPDIVIYPGKAPENENKFSLKEADLKHHLEQELKKIDDKTPNSKEADKDKKNEEEKEVTP
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCH
KMINDDIQLKTAIDSLKTWSIVDDKMDEKTPKKK
HHHCCCCEEHHHHHHHHEEEECCHHHHCCCCCCC
>Mature Secondary Structure 
TKRLFKGLLAISLAVSLHGGEVKEKKPVKPVKEDPQELAAKRVEAFNRFTNVVTEIEKK
CHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVDKITISEIMTKAIEGLLSNLDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDGVLT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
VIAPLEGTPAYKAGVKAGDNILKINNESTLSMSIDDAINLMRGKPKTPIQITIVRKNEPK
EEECCCCCCCHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECCCCC
PLVFNIVRDIIKIPSVSVKKIKDTPYLYVRVSSFDKNVTKSVLDGLKANPKTKGIVLDLR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEC
GNPGGLLNQAVGLSNLFVKEGILVSQKGKNKEENLEYKANGRAPYTNLPIAVLVNGGSAS
CCCCHHHHHHHCHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAIIIGEKTFGKGSVQMLLPVNKDEAIKITTARYYLPSGRTIQAKGI
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCC
TPDIVIYPGKAPENENKFSLKEADLKHHLEQELKKIDDKTPNSKEADKDKKNEEEKEVTP
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCH
KMINDDIQLKTAIDSLKTWSIVDDKMDEKTPKKK
HHHCCCCEEHHHHHHHHEEEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]