Click here to switch to the map view.

The map label for this gene is 188528078

Identifier: 188528078

GI number: 188528078

Start: 1312874

End: 1313488

Strand: Direct

Name: 188528078

Synonym: HPSH_06675

Alternate gene names: NA

Gene position: 1312874-1313488 (Clockwise)

Preceding gene: 188528077

Following gene: 188528079

Centisome position: 81.62

GC content: 38.21

Gene sequence:

>615_bases
ATGCAAGCAGTGATTTTAGCGAATGGGGAGTTTCCTAAATCTCAAAAATGCTTAGACATTTTAAAAAACGCTCCCTTTTT
AATCGCATGCGATGGGGCTGTTGCTTCATTGCATGCGCTTCAATTCAAACCCAGCGTTGTTATAGGCGATCTAGATAGCA
TTGATTCGCATTTGAAAGCCTTGTATCACCCTATATGCGTGAGCGAACAAAACAGCAACGATTTATCCAAAGCCTTTTTT
TATGCTTTGAACAGGGGCTGTGATGATTTTATTTTTTTAGGGTTGAATGGCAAGCGAGAAGACCACGCTTTAGCGAACAC
TTTTTTATTGTTGGAGTATTTTAAGTTTTGCAAAAAAATCCAAGCCGTAAGCGATTATGGTCTTTTTAGGGTGCTAGAAA
CCCCTTTTACTTTGCCCAGTTTTAAAGGGGAACAAATCTCGCTTTTTAGCTTGGATTTTAACGCCCAATTCACTTCCAAA
AATCTCAAATACCCCTTAAAAAACTTGCGTTTAAAAACGCTCTTTTCTGGCTCGCTCAATGAAGCTACAGATAGTTTTTT
TAGCCTTAACTCTACACCTAAATCGGTGGTTTTGGTGTATCAAAAATTCTTATGA

Upstream 100 bases:

>100_bases
TTTGTATTTTTCAAATTTCTACAGAGAGCTTGGTGCAACTCTTCACAACGATTCTATACCTTTTTATTGGCATGTATTAT
TTTAAGCGCTGGAACAAGTC

Downstream 100 bases:

>100_bases
GCGGGTTTTATTAGGCGAATTTTTGTCTGTATATTGCGCCAAGTTAAGGAGCATTTAAGAGAGTGGGCATAGAGGGTTCA
TCATTTTTTAACAAAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Thiamine Diphosphokinase; Thiamin Pyrophosphokinase Protein; Thiamin Pyrophosphokinase

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQAVILANGEFPKSQKCLDILKNAPFLIACDGAVASLHALQFKPSVVIGDLDSIDSHLKALYHPICVSEQNSNDLSKAFF
YALNRGCDDFIFLGLNGKREDHALANTFLLLEYFKFCKKIQAVSDYGLFRVLETPFTLPSFKGEQISLFSLDFNAQFTSK
NLKYPLKNLRLKTLFSGSLNEATDSFFSLNSTPKSVVLVYQKFL

Sequences:

>Translated_204_residues
MQAVILANGEFPKSQKCLDILKNAPFLIACDGAVASLHALQFKPSVVIGDLDSIDSHLKALYHPICVSEQNSNDLSKAFF
YALNRGCDDFIFLGLNGKREDHALANTFLLLEYFKFCKKIQAVSDYGLFRVLETPFTLPSFKGEQISLFSLDFNAQFTSK
NLKYPLKNLRLKTLFSGSLNEATDSFFSLNSTPKSVVLVYQKFL
>Mature_204_residues
MQAVILANGEFPKSQKCLDILKNAPFLIACDGAVASLHALQFKPSVVIGDLDSIDSHLKALYHPICVSEQNSNDLSKAFF
YALNRGCDDFIFLGLNGKREDHALANTFLLLEYFKFCKKIQAVSDYGLFRVLETPFTLPSFKGEQISLFSLDFNAQFTSK
NLKYPLKNLRLKTLFSGSLNEATDSFFSLNSTPKSVVLVYQKFL

Specific function: Unknown

COG id: COG1564

COG function: function code H; Thiamine pyrophosphokinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22856; Mature: 22856

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAVILANGEFPKSQKCLDILKNAPFLIACDGAVASLHALQFKPSVVIGDLDSIDSHLKA
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEECHHHHHHHHHH
LYHPICVSEQNSNDLSKAFFYALNRGCDDFIFLGLNGKREDHALANTFLLLEYFKFCKKI
HHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QAVSDYGLFRVLETPFTLPSFKGEQISLFSLDFNAQFTSKNLKYPLKNLRLKTLFSGSLN
HHHHCCCHHEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCCHHHCEEEEEECCCCC
EATDSFFSLNSTPKSVVLVYQKFL
HHHHHHEECCCCCHHHHHEEECCC
>Mature Secondary Structure
MQAVILANGEFPKSQKCLDILKNAPFLIACDGAVASLHALQFKPSVVIGDLDSIDSHLKA
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEECHHHHHHHHHH
LYHPICVSEQNSNDLSKAFFYALNRGCDDFIFLGLNGKREDHALANTFLLLEYFKFCKKI
HHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QAVSDYGLFRVLETPFTLPSFKGEQISLFSLDFNAQFTSKNLKYPLKNLRLKTLFSGSLN
HHHHCCCHHEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCCHHHCEEEEEECCCCC
EATDSFFSLNSTPKSVVLVYQKFL
HHHHHHEECCCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA