Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528079

Identifier: 188528079

GI number: 188528079

Start: 1313800

End: 1313952

Strand: Direct

Name: 188528079

Synonym: HPSH_06680

Alternate gene names: NA

Gene position: 1313800-1313952 (Clockwise)

Preceding gene: 188528078

Following gene: 188528109

Centisome position: 81.68

GC content: 33.33

Gene sequence:

>153_bases
TTGCAGTTTGAAGGTTATCGCTCAACTAACGCCGAGCTCTTTTATATTTTGATTACAGAAAACGCTTTTTGGCATTTTTT
AAATTTTACAATCAATAGAACAAGACCAGAGCTTTTAAGCGCTTCTTTTGAAAAGATGGAATCAAAGCGATAA

Upstream 100 bases:

>100_bases
ATAAAAATGCAAGAAATACCGCTCAATTAAAGGGTGGGATAGAAGCGAGCTTTGAGTTTATTTTAATTTTTTAAAAAATG
GGGTTTTAGTTGCTTGATTT

Downstream 100 bases:

>100_bases
TTACTAACCAAGACTAAAATCTTGGCCAGCAGTCCGTCAAATTTCACACAAATTCAATGGTGGCTAGAGTGGAAGCGTCC
CCTCTTCTAAAAGTGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MQFEGYRSTNAELFYILITENAFWHFLNFTINRTRPELLSASFEKMESKR

Sequences:

>Translated_50_residues
MQFEGYRSTNAELFYILITENAFWHFLNFTINRTRPELLSASFEKMESKR
>Mature_50_residues
MQFEGYRSTNAELFYILITENAFWHFLNFTINRTRPELLSASFEKMESKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6079; Mature: 6079

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFEGYRSTNAELFYILITENAFWHFLNFTINRTRPELLSASFEKMESKR
CCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQFEGYRSTNAELFYILITENAFWHFLNFTINRTRPELLSASFEKMESKR
CCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA