| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is trpE [H]
Identifier: 188528071
GI number: 188528071
Start: 1306734
End: 1308371
Strand: Reverse
Name: trpE [H]
Synonym: HPSH_06640
Alternate gene names: 188528071
Gene position: 1308371-1306734 (Counterclockwise)
Preceding gene: 188528072
Following gene: 188528070
Centisome position: 81.34
GC content: 39.5
Gene sequence:
>1638_bases TTGAATTTATCGCACCAAATCTTTCTTGCCACACACAAGAAAGATAACGGCAACAAGCACCACACAAATAACCTTTTATT GCCCATTTATCTATTTCTTGTAGAATGCAAGTTTATTTTTAGCGTGAAGAAATTGATGATCAGTCTAGTAGAAAAAGCCC CTTACATTCCCTATCCCCTAGCTCTTTATGAAAAATTAGAGCAACAGCACACCTTGCTTTTTGAAAGCGCTGAGATTGAG AGTAAAGCGCACACCAAATCCCTTTTAATGGCTAAAGCCTGTTTGAAGCTGATTTGCAACCACAATATCGTAACTATCAC TAGTCTAACGCCTAATGGCGGGGCGTTTTTGCAAAAATTGAGTGCGTTTTTTAAAACGCCTATACAAGACAATGCCCTAA TTTTAACCTACACCAAAAATAAAAAAACGCAAGATGAGTTTTTAAAGCTCTTTGAGCCTAGCCCTTTTGACGCTTTAAGG GGGATTTTTAAAAGCGTTAAAACAAAACCCAAACACCCCTTTACGCTTTTAAGCGCGGGCGTTTTTTCTTTTGAAATGCT CAATTTTTTTGAAGACTTGCCTCACTTAAAAGCGCAAGACAACACAGCGCATGACTTTATTTTTTTTGTTGCACAAAATT TGATCATCATAGACCATAAAGAAAAAAGCGCTGAAATCTTGGGGGCGTGTTTTGATGAGCGTTTTAAAACAGAGATAGCC CAAGAATTACAGGATTTAAAAGAGTTGGCTAAAAACATCAAAAGCGATTTTATCCCTAAAAAATCCAAGCAAAGTAAAGA AGTTAGCACTAATTGCAGCGATAGCGAGTTTGAAAAAAAGGCGCTATCCTTACAAGAAGAAATCAAAAAAGGCGAGATTT TTCAAGCGGTGTTGTCGCGTAGCTTTTATATGGAGTGCTTGGAGGGTTTGAGCGCGTATTACCATTTAAAGCTGACTAAT CCTAGCCCCTATATGTTCTATATCAAAGACGGCGATTTTGTTCTTTTTGGGGCAAGCCCTGAGAGCGCTTTAAAATACAA CGCTTTAACCAATACGGCTGAAATTTATCCCATTGCTGGCACTCGTTTAAGGGGTAAGGACAAACAAGGGAATATTGATT ACGATTTAGACAGTAAAATGGAATTTGATTTGCAACACGATTATAAAGAAAGGGCTGAACACATCATGCTAGTGGATTTA GCCAGAAACGACATGGCCAGAGTTTCAAAAAAACGCTATTGCGATAAGCTTTTAAAAGTGGATAAGTATTCCAATGTCAT GCATTTAGTCTCAAGGGTTGTTGGGGAATTGAAAAAAGGGTGCGATAGTTTGCATGCTTACAGGAGCTTTATGAACGCCG GCACGCTTAGTGGGGCGCCTAAAATTTCTGCGATCAGGCTCATTTACCAATTGGAAAACCAAAGGAGAGGCTCTTATGGG GGGAGTGTGGGGTATTTAAATAGCGAGGGTTCTATGGATTCTTGCATCACTATCCGTTCATGTTTTGTCAAAAACAATAG GGCCGTGATCCAAGCAGGAGCTGGTATTGTGCTAGACAGCGTGCCACAAAACGAAGCGAATGAAACAAGAGCCAAAGCAC AAGCCCTTATTGATGCGATCAGGAAAACAATTTTATGA
Upstream 100 bases:
>100_bases AGATGGCGGCCTTTCAATGAGCGTTTTTTAGGCATCACCCCGCCTAATGGCTCAAACGATATGGGTTTGATTGACATTGA AAAAGAGGGTGAAACCATCC
Downstream 100 bases:
>100_bases AAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAACTTGGTGTATGAATTAGAGTGTTTGGGTTATGAAGTGGCT GTTTATCAAAACGATATTGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNLSHQIFLATHKKDNGNKHHTNNLLLPIYLFLVECKFIFSVKKLMISLVEKAPYIPYPLALYEKLEQQHTLLFESAEIE SKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFKTPIQDNALILTYTKNKKTQDEFLKLFEPSPFDALR GIFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAQDNTAHDFIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIA QELQDLKELAKNIKSDFIPKKSKQSKEVSTNCSDSEFEKKALSLQEEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTN PSPYMFYIKDGDFVLFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDL ARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIRLIYQLENQRRGSYG GSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKAQALIDAIRKTIL
Sequences:
>Translated_545_residues MNLSHQIFLATHKKDNGNKHHTNNLLLPIYLFLVECKFIFSVKKLMISLVEKAPYIPYPLALYEKLEQQHTLLFESAEIE SKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFKTPIQDNALILTYTKNKKTQDEFLKLFEPSPFDALR GIFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAQDNTAHDFIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIA QELQDLKELAKNIKSDFIPKKSKQSKEVSTNCSDSEFEKKALSLQEEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTN PSPYMFYIKDGDFVLFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDL ARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIRLIYQLENQRRGSYG GSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKAQALIDAIRKTIL >Mature_545_residues MNLSHQIFLATHKKDNGNKHHTNNLLLPIYLFLVECKFIFSVKKLMISLVEKAPYIPYPLALYEKLEQQHTLLFESAEIE SKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFKTPIQDNALILTYTKNKKTQDEFLKLFEPSPFDALR GIFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAQDNTAHDFIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIA QELQDLKELAKNIKSDFIPKKSKQSKEVSTNCSDSEFEKKALSLQEEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTN PSPYMFYIKDGDFVLFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDL ARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIRLIYQLENQRRGSYG GSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKAQALIDAIRKTIL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=502, Percent_Identity=45.8167330677291, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1788114, Length=397, Percent_Identity=28.2115869017632, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1786809, Length=220, Percent_Identity=28.1818181818182, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=281, Percent_Identity=42.3487544483986, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324361, Length=374, Percent_Identity=23.2620320855615, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 61748; Mature: 61748
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSHQIFLATHKKDNGNKHHTNNLLLPIYLFLVECKFIFSVKKLMISLVEKAPYIPYPL CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ALYEKLEQQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKL HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHH SAFFKTPIQDNALILTYTKNKKTQDEFLKLFEPSPFDALRGIFKSVKTKPKHPFTLLSAG HHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH VFSFEMLNFFEDLPHLKAQDNTAHDFIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH QELQDLKELAKNIKSDFIPKKSKQSKEVSTNCSDSEFEKKALSLQEEIKKGEIFQAVLSR HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFYMECLEGLSAYYHLKLTNPSPYMFYIKDGDFVLFGASPESALKYNALTNTAEIYPIAG HHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHEECCCCCCCEEEECCC TRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKV CEECCCCCCCCCCCCCCCCEECCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHH DKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIRLIYQLENQRRGSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC GSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKAQALIDAI CCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHH RKTIL HHHCC >Mature Secondary Structure MNLSHQIFLATHKKDNGNKHHTNNLLLPIYLFLVECKFIFSVKKLMISLVEKAPYIPYPL CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ALYEKLEQQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKL HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHH SAFFKTPIQDNALILTYTKNKKTQDEFLKLFEPSPFDALRGIFKSVKTKPKHPFTLLSAG HHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH VFSFEMLNFFEDLPHLKAQDNTAHDFIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH QELQDLKELAKNIKSDFIPKKSKQSKEVSTNCSDSEFEKKALSLQEEIKKGEIFQAVLSR HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFYMECLEGLSAYYHLKLTNPSPYMFYIKDGDFVLFGASPESALKYNALTNTAEIYPIAG HHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHEECCCCCCCEEEECCC TRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKV CEECCCCCCCCCCCCCCCCEECCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHH DKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIRLIYQLENQRRGSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC GSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKAQALIDAI CCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHH RKTIL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]