| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is trpG [H]
Identifier: 188528070
GI number: 188528070
Start: 1306153
End: 1306737
Strand: Reverse
Name: trpG [H]
Synonym: HPSH_06635
Alternate gene names: 188528070
Gene position: 1306737-1306153 (Counterclockwise)
Preceding gene: 188528071
Following gene: 188528069
Centisome position: 81.24
GC content: 38.12
Gene sequence:
>585_bases ATGAAAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAACTTGGTGTATGAATTAGAGTGTTTGGGTTATGAAGT GGCTGTTTATCAAAACGATATTGATCCGAGTTATCTTATAGATTTAATGAATGAAGAATCAAAAACGCCTTTATTGTTCA TTTCACCCGGACCTGGTAACCCTAGTAGTTCAGGCAATCTTTTAAAAATCATTGAAATGGCTAAAAAGAAATTCCCCATT TTAGGGGTTTGTTTGGGCTTACAAGCTTTAGCGCAAAGCTATGGGGCTAAAATCATAAGGAGTAAAGAAATCGTGCATGG CAAAGCGACGACTATCGCGCTCAAAAAGCATGCCGTTTTTAAAGGTTTAGGGGAGAGCATGGTGGTGGGGCGTTACCATT CTTTAATGGCAAGCGGATTGCCTAAAAATTTGGAAGTGATCGCTGAGCATGACAATATCCCTATGGCTATTATCAATGAA GAAGACAAGATTTTAGCCTATCAATTCCACCCTGAAAGCATCATGACTTTACAAGGGAGGGCGTTGTTAGAGCAAAGCGT GGGGTTTTTAGAAGGGTTATTATGA
Upstream 100 bases:
>100_bases CAGGAGCTGGTATTGTGCTAGACAGCGTGCCACAAAACGAAGCGAATGAAACAAGAGCCAAAGCACAAGCCCTTATTGAT GCGATCAGGAAAACAATTTT
Downstream 100 bases:
>100_bases AAGAGATTTTAAACGCTCTATACCATCAAAAAGACTTAAACGATGGAGAAGTTAAAAAATTATTTACCCTTATTATCAAC GAAAAAGTAAGCCCGGCGCA
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLIDLMNEESKTPLLFISPGPGNPSSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIINE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL
Sequences:
>Translated_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLIDLMNEESKTPLLFISPGPGNPSSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIINE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL >Mature_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLIDLMNEESKTPLLFISPGPGNPSSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIINE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLL
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=40.7407407407407, Blast_Score=165, Evalue=2e-42, Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=40, Blast_Score=130, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6322638, Length=198, Percent_Identity=37.8787878787879, Blast_Score=119, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323873, Length=108, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21481; Mature: 21481
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLIDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PSSSGNLLKIIEMAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVF CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEECCCEECCCEEEEEEHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIINEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLL HHHHHHHHHHHHCC >Mature Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLIDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PSSSGNLLKIIEMAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVF CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEECCCEECCCEEEEEEHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIINEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]