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The map label for this gene is nocM [H]

Identifier: 188527954

GI number: 188527954

Start: 1188707

End: 1189360

Strand: Direct

Name: nocM [H]

Synonym: HPSH_06045

Alternate gene names: 188527954

Gene position: 1188707-1189360 (Clockwise)

Preceding gene: 188527951

Following gene: 188527955

Centisome position: 73.9

GC content: 38.69

Gene sequence:

>654_bases
ATGGCATTAGATTGGGATTTTATGTTTCACTCCATCCCTGCGTTTCTTAAGGGGTTAGAACTCACGCTTTATATTTCTTT
TTTTGGGATTTTGCTCTCTCTTTTGGTGGGGTTTTTGTGTGCGATCGTTTTGTATTTTAAAACGCGCTTTATCTCCCCTA
TCGTCTATATCTATGGCGAAATTTCTAGGAACACGCCCCTACTCATCCAGCTTTTCTTTTTGTATTACGGGTTGAATGAA
ATCGGTTTGAGCGCTTTAGAGTGCGCGATTTTAGCGTTAGGGTTTTTGGGTGGGGGGTATATGAGTCAAAGTTTTTTGCT
TGGGTTTAAAAGCTTAGCTTCCATTCAAAAAGAAAGCGCTTTGAGTTTAGGGTTTGGCCCTTTGAAAATGATGTATTACA
TCATTTTACCTCAAAGTTTAAGCGTTTCTATGCCTTCTATAGGGGCGAATGTGATTTTTTTACTCAAAGAAACTTCTGTG
GTGGGCGCGATAGCCCTAACCGATATTATGTTTGTGGCGAAAGATTTTATTGGCATTTATTACAAAACGACTGAAAGCCT
TTTGATGTTAAGCGTTGCTTATTTGATCGCTTTGCTCCCTTTAAGCGTTTTGTTTGTGATCTTAGAGCGTTTCTTTAAAA
AGAAAGTGGCTTAA

Upstream 100 bases:

>100_bases
AATAAAGGCTTGGGTTTTCCAAACTTCTAACAATTAGGGTAATAAGAGCCGTTTTTAAACATGATGCTTTAAAGCGTCAT
TAATTTTAAGGTATAGCGTT

Downstream 100 bases:

>100_bases
AAATGGGAGTTTTACTAGAGTTAGACAACCTTAAGCGCTTGTTAGAAGGGTTTGAAACCACCCTTTTAATCGCTCTTAGC
TCTGCGGTTATTTCAATCGT

Product: glutamine ABC transporter, permease protein

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MALDWDFMFHSIPAFLKGLELTLYISFFGILLSLLVGFLCAIVLYFKTRFISPIVYIYGEISRNTPLLIQLFFLYYGLNE
IGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSV
VGAIALTDIMFVAKDFIGIYYKTTESLLMLSVAYLIALLPLSVLFVILERFFKKKVA

Sequences:

>Translated_217_residues
MALDWDFMFHSIPAFLKGLELTLYISFFGILLSLLVGFLCAIVLYFKTRFISPIVYIYGEISRNTPLLIQLFFLYYGLNE
IGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSV
VGAIALTDIMFVAKDFIGIYYKTTESLLMLSVAYLIALLPLSVLFVILERFFKKKVA
>Mature_216_residues
ALDWDFMFHSIPAFLKGLELTLYISFFGILLSLLVGFLCAIVLYFKTRFISPIVYIYGEISRNTPLLIQLFFLYYGLNEI
GLSALECAILALGFLGGGYMSQSFLLGFKSLASIQKESALSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVV
GAIALTDIMFVAKDFIGIYYKTTESLLMLSVAYLIALLPLSVLFVILERFFKKKVA

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=26.2672811059908, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=29.8578199052133, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=26.0663507109005, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786874, Length=235, Percent_Identity=22.9787234042553, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787086, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=28.0542986425339, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24153; Mature: 24021

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDWDFMFHSIPAFLKGLELTLYISFFGILLSLLVGFLCAIVLYFKTRFISPIVYIYGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRNTPLLIQLFFLYYGLNEIGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQKESA
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDFIGIY
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
YKTTESLLMLSVAYLIALLPLSVLFVILERFFKKKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALDWDFMFHSIPAFLKGLELTLYISFFGILLSLLVGFLCAIVLYFKTRFISPIVYIYGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRNTPLLIQLFFLYYGLNEIGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQKESA
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSLGFGPLKMMYYIILPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDFIGIY
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
YKTTESLLMLSVAYLIALLPLSVLFVILERFFKKKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]