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The map label for this gene is 188527951

Identifier: 188527951

GI number: 188527951

Start: 1184755

End: 1186170

Strand: Direct

Name: 188527951

Synonym: HPSH_06030

Alternate gene names: NA

Gene position: 1184755-1186170 (Clockwise)

Preceding gene: 188527949

Following gene: 188527954

Centisome position: 73.65

GC content: 43.71

Gene sequence:

>1416_bases
ATGAAAAAGGCAAGTCAGGTTTTATTCTTTGGGGCATTTTTAAGCTATTCGTTACAAGGTTTTGAAGCTAAGCTCAACGG
CTTTGTGGATCAATCCAGCACTATCGGTTTTAACCAACACAAAATCAATAAAGAAAGAGGTATCTACCCTATGCAGCAAT
TCGCAACGATTGCGGGCTATTTAGGGCTTGGTTTTAGCTTGTTACCCAAAAAGGTTTCAGACCATGTTCTAAAAGGCAAA
ATAGGGGGCATGGTGGGATCTATTTTCTATGACGGCACGAAGAAGTTTGAAGACGGATCTGTATCTTACAACCTCTTTGG
TTATTATGATGGGTTCATGGGGGGTTATACAAACATCTTACAAACCGATAGCCTTGAAACACAGAACATGAAATACAATA
AAAATGTCCGCAATTATGTCTTTAGCGATGCGTATTTGGAATACCGCTATAAAGATTATTTTGAGTTCAAGGGCGGGCGC
TACCTTTCTGGCATGCCTTTTAGAAGCGGGCAAACTCAAGGCTTTCAAGTTTCTGGGCAATACAAGCATGCGCGCTTGAC
TTGGTTTAGCTCTTTTGGGAGGGCGTTCGCTTATGGTTCGTTTTTGATGGATTGGTTTGCCGCTAGGACCACTTATAGCG
GGGGCTTTACCAAAAACGATAAGGGAGGTTATGATAGCCATGGGCAAAAGGTGCTTTATGGCACGCATGCGGTGCAACTC
ACCTATAAACCTCATCGTTTTCTCGTGGAGGCCTTCTATTACCTTTCGCCTCAAATCTTTAACGCTCCGGGCATTAAGAT
TGGTTGGGACTCTAACCCTAATTTTAGCGGCACAGGCTTTCGCTCAGATACGAGCATCACAGGGTTTTTCCCCATTTACT
ACCCTTGGATGATCGTTAAATCTAATGGGAGTCCGGTCTATAGATACGACACGCCAGCCACTCAAAACGGGCAAAATCTC
ATGATCCGCCAACGCTTTGATATAAACAATTACAATGTTTCCATCGCTTTTTATAAAGTCTTTCAAAACGCTAATGGTTG
GATAGGCAATATGGGTAATCCAAGCGGTGTGATAATGTCAGGTAACAGCGTGTATGCTGGTTTTTCAGGCACAGCCCTTA
AAAGAGACGCCGCTACCATTCTCCTTTCTTGTGGCGGCACTCATTTTGCCAAAAAATTCACATGGAAATTCGCCACGCAA
TACTCCAATTCAGTGGTCTCTTGGGAAGCAAGAGCGATGATCTCTTTAGCCTATAAATTCTCTGAATATTTGAGCGGCAG
CATCGATCTTTCATATTATGGCGTGCACACTAACAAAGGCTTTAAACCGGGTGAAAACGGGCCTGTGCCTAAAAACTTCC
CCGCCCTTTATTCTGACAGGAGCGCGTTATACACGGCCCTAGTAGCGTCATTTTGA

Upstream 100 bases:

>100_bases
ACATATTATAATTATTTCAAAGCTAAGAATAATAAAAATCAAAGAATAGATTTATCTTTAAAAGTATTTGCGTTTATCAA
TCTCATTTTAGGAGGCATGC

Downstream 100 bases:

>100_bases
CGCTATGATCATAAAATATAGCAGGCGTCATTTTGACGCTGTTTCTCTAACCTATATATAATTTCTTTTCAAGCCAAAGC
CCTTTTTTAAATCATACCCA

Product: outer membrane protein HofH

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD; Outermembrane Protein HofE

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKKASQVLFFGAFLSYSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNILQTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGR
YLSGMPFRSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
MIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMSGNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLAYKFSEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALVASF

Sequences:

>Translated_471_residues
MKKASQVLFFGAFLSYSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNILQTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGR
YLSGMPFRSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
MIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMSGNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLAYKFSEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALVASF
>Mature_471_residues
MKKASQVLFFGAFLSYSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNILQTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGR
YLSGMPFRSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
MIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMSGNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLAYKFSEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALVASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52881; Mature: 52881

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKASQVLFFGAFLSYSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
CCCHHHEEEEEHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNIL
HHCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHHHH
QTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGRYLSGMPFRSGQTQGFQVSGQ
CCCCCCCCCCCCCCCHHHHEECCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCEEEECC
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVK
EECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEE
SNGSPVYRYDTPATQNGQNLMIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
CCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
GNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLAYKF
CCEEEECCCCCEECCCCEEEEEECCCCHHHHHEEEEEEHHHCCCEEEEHHHHHHHHHHHH
SEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALVASF
HHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKASQVLFFGAFLSYSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
CCCHHHEEEEEHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVSYNLFGYYDGFMGGYTNIL
HHCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHHHH
QTDSLETQNMKYNKNVRNYVFSDAYLEYRYKDYFEFKGGRYLSGMPFRSGQTQGFQVSGQ
CCCCCCCCCCCCCCCHHHHEECCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCEEEECC
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVK
EECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEE
SNGSPVYRYDTPATQNGQNLMIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
CCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
GNSVYAGFSGTALKRDAATILLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLAYKF
CCEEEECCCCCEECCCCEEEEEECCCCHHHHHEEEEEEHHHCCCEEEEHHHHHHHHHHHH
SEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALVASF
HHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA