| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is pgi
Identifier: 188527949
GI number: 188527949
Start: 1182809
End: 1184446
Strand: Direct
Name: pgi
Synonym: HPSH_06020
Alternate gene names: 188527949
Gene position: 1182809-1184446 (Clockwise)
Preceding gene: 188527948
Following gene: 188527951
Centisome position: 73.53
GC content: 40.35
Gene sequence:
>1638_bases ATGCTAACCCAATTAAAAACTTATCCAAAATTACTCAAACATTATGAAGAAATCAAAGAAGTGCATATGCGCGATTGGTT TTCTAAAGACAAAGAGCGAGCGAGCCGCTATTTTTTGCAATTTGAAAGCTTGAGCTTGGATTATTCCAAAAACCGCTTGA ACGATACCACTTTAAAGCTTCTTTTTGAATTAGCGAATGACTGCTCTTTAAAAGAAAAAATTGAAGCGATGTTTAAAGGC GAAAAGATCAACACCACCGAAAAAAGGGCCGTTTTACACACCGCTTTAAGAAGCTTGAACGACACTGAAATTTTACTAGA CAACATGGAAGTGTTAAAAAGTATTAGAAGCGTTTTAAAACGCATGCGAGCCTTTAGCGATAGCGTGAGGAGCGGTAAAA GATTAGGCTATACCAATCAAGTGATCACCGATATTGTCAATATCGGCATTGGGGGGTCAGATTTGGGCGCTTTAATGGTT TGCACCGCGTTAAAACGCTACGCCCACCCGAGATTAAAAATGCATTTTGTGTCTAATGTGGATGGCACACAGATTTTAGA TGTTTTAGAAAAACTCAATCCAGCCAGCACGCTTTTTATCGTGGCTTCTAAGACTTTTTCCACTCAAGAAACCTTAACCA ACGCCCTAACCGCTAGAAAATGGTTTGTAGAAAGAAGCGGCGATGAAAAGCATATCGCTAAACACTTTGTAGCGGTATCC ACTAATAAAGAAGCCGTGCAACAATTTGGCATTGACGAGCACAACATGTTTGAATTTTGGGATTTCGTAGGGGGGCGCTA TAGTTTGTGGTCGGCTATTGGCTTATCCATCATGATCTATTTAGGGAAGAAAAATTTTAACGCTCTTTTGAAAGGAGCGT ATTTGATGGATGAGCATTTTAGAAACGCCCCTTTTGAAAGCAATTTACCCGTTTTAATGGGGCTAATTGGCGTGTGGTAT ATCAATTTTTTCCAGTCCAAAAGCCATTTAATCGCTCCTTACGATCAGTATTTAAGGCATTTCCCTAAGTTCATTCAGCA ATTAGATATGGAAAGTAATGGCAAACGCATCAGCAAAAAAGGCGAAATCATCCCCTATGACACCTGCCCTGTTGTTTGGG GCGATATGGGCATTAACGCTCAGCATGCCTTTTTCCAGCTCTTGCATCAAGGCACGCATTTAATACCCATTGATTTTATC GCTTCCTTAGATAAAAAGCCTAACGCTAAAGGCCACCATGAGATTTTATTTAGCAATGTTTTAGCGCAAGCGCAAGCTTT CATGAAAGGCAAGAGTTATGAAGAAGCGCTTGGGGAATTGCTCTTTAAAGGATTAGACAAAGATGAAGCCAAAGATTTAG CCCACCACAGGGTGTTTTTTGGCAACCGCCCCTCTAATATCCTTTTATTAGAAAAGATTTCACCAAGCAATATTGGGGCG CTAGTGGCTCTTTATGAGCATAAAGTCTTTGTGCAAGGGGTTATTTGGGATATTAACAGCTTTGATCAATGGGGCGTGGA GCTTGGGAAAGAACTGGCCGTGCCGATTTTACAAGAATTAGAAGGGCATAAAAGCAACGCTTATTTTGACAGCTCCACTA AGCGCTTGATAGAATTGTATAAGAATTACAACCAATAG
Upstream 100 bases:
>100_bases CCTATAGTAAGCTAGAATGTTTTTTCTTAAAGTTTCCATTTGAAAATTGTAATTAAAACTAGCTTATAATACAGCGTTAT ATCTTTTAAAAGGGGTATTG
Downstream 100 bases:
>100_bases GCTTTGTTTGATAACAAGATAAAACCTAAAAAAACAATAAAGCAAAGCTTAATCCCCGTTCTCAAGCGATCCATTCAAAA TAATCCGTTAATCATAACGG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MLTQLKTYPKLLKHYEEIKEVHMRDWFSKDKERASRYFLQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYAHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKRLIELYKNYNQ
Sequences:
>Translated_545_residues MLTQLKTYPKLLKHYEEIKEVHMRDWFSKDKERASRYFLQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYAHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKRLIELYKNYNQ >Mature_545_residues MLTQLKTYPKLLKHYEEIKEVHMRDWFSKDKERASRYFLQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYAHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKRLIELYKNYNQ
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=547, Percent_Identity=51.5539305301645, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI296080693, Length=547, Percent_Identity=48.0804387568556, Blast_Score=519, Evalue=1e-147, Organism=Escherichia coli, GI1790457, Length=542, Percent_Identity=53.1365313653137, Blast_Score=589, Evalue=1e-169, Organism=Caenorhabditis elegans, GI71996703, Length=548, Percent_Identity=49.4525547445255, Blast_Score=548, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71996708, Length=548, Percent_Identity=49.4525547445255, Blast_Score=547, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6319673, Length=552, Percent_Identity=49.0942028985507, Blast_Score=525, Evalue=1e-150, Organism=Drosophila melanogaster, GI24651916, Length=548, Percent_Identity=53.6496350364963, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI24651914, Length=548, Percent_Identity=53.6496350364963, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI17737445, Length=548, Percent_Identity=53.6496350364963, Blast_Score=582, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 62447; Mature: 62447
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQLKTYPKLLKHYEEIKEVHMRDWFSKDKERASRYFLQFESLSLDYSKNRLNDTTLKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIRSVLK HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHFVSNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC DGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHF CCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH RNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEECCC GEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLDKKPNAKGHHEILFSNV CCEECCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHH LAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKRLIELY HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH KNYNQ HCCCC >Mature Secondary Structure MLTQLKTYPKLLKHYEEIKEVHMRDWFSKDKERASRYFLQFESLSLDYSKNRLNDTTLKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIRSVLK HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHFVSNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC DGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHF CCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH RNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEECCC GEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLDKKPNAKGHHEILFSNV CCEECCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHH LAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKRLIELY HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH KNYNQ HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA