The gene/protein map for NC_009634 is currently unavailable.
Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is hcpE [H]

Identifier: 188527898

GI number: 188527898

Start: 1134057

End: 1134827

Strand: Reverse

Name: hcpE [H]

Synonym: HPSH_05745

Alternate gene names: 188527898

Gene position: 1134827-1134057 (Counterclockwise)

Preceding gene: 188527899

Following gene: 188527897

Centisome position: 70.55

GC content: 37.87

Gene sequence:

>771_bases
ATGGGATACGCAAGCAAATTAGCCTTGAAGATTTGTTTGGCGAGTTTATGTTTATTTAGTGCTCTTGGTGCAGAACACCT
TGAACAAAAAGGGAATTATATTTATAAGGGGGAGGAAGCCTATAATAATAGGGAATACGAGCGAGCGGCTTCTTTTTATA
AGAGCGCTATTAAAAATGGCGAGCCGCTTGCTTATGTTCTTTTAGGAATCATGTATGAAAATGGTAGGGGTGTGCCTAAA
GATTACAAGAAAGCGGTTGAATATTTTCAAAAAGCGGTTGATAACGACATACCTAGAGGGTATAATAATTTAGGCGTGAT
GTATAAAGAGGGTAGGGGCGTTACTAAAGATGAAAAGAAAGCCGTGGAATATTTTAGAATAGCTACAGAGAAAGGCTATA
CTAACGCCTATATAAACTTAGGCATCATGTATATGGAGGGTAGGGGCGTTCCAAGCAACTATGCGAAAGCGACAGAGTGC
TTTAGAAAAGCGATGCATAAGGGTAATGTAGAAGCTTATATCCTTTTAGGGGATATTTATTATAGTGGGAATGATCAATT
GGGTATTGAACCAGACAAAGATAAGGCTATTGTCTATTATAAAATGGCGGCTGATATGAGTTCTTCTAGGGCTTATGAAG
GGTTATCAGAGTCTTATCGGTATGGGTTAGGTGTGGAAAAAGATAAGCAAAAGGCTGAAGAATACATGCAAAAAGCATGC
GATTTTGACATTGATAAAAATTGTAAGAAAAAGAATACTTCAAGCCGATGA

Upstream 100 bases:

>100_bases
GTTTGAGAATGTTTGCTGGTTTTGGAACGCATGCAGTTTCTTTTTTAAGATTGGTAGCCATTGGCATTATGTTTGATCTT
GTTAAAGCAGAGGAGTAACA

Downstream 100 bases:

>100_bases
CTCTCAAACTTGGGCTTGATTCAAGGATTTTTTGTTTTATGTTAAGTAGCGTGTTTTTTGAACAATTGATTTGAAGCGGT
TAGATTAAAGGTATTGCGTT

Product: cysteine-rich protein X

Products: NA

Alternate protein names: Cysteine-rich protein E [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MGYASKLALKICLASLCLFSALGAEHLEQKGNYIYKGEEAYNNREYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPK
DYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGRGVTKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATEC
FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLSESYRYGLGVEKDKQKAEEYMQKAC
DFDIDKNCKKKNTSSR

Sequences:

>Translated_256_residues
MGYASKLALKICLASLCLFSALGAEHLEQKGNYIYKGEEAYNNREYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPK
DYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGRGVTKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATEC
FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLSESYRYGLGVEKDKQKAEEYMQKAC
DFDIDKNCKKKNTSSR
>Mature_255_residues
GYASKLALKICLASLCLFSALGAEHLEQKGNYIYKGEEAYNNREYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKD
YKKAVEYFQKAVDNDIPRGYNNLGVMYKEGRGVTKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECF
RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLSESYRYGLGVEKDKQKAEEYMQKACD
FDIDKNCKKKNTSSR

Specific function: May hydrolyze 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=193, Percent_Identity=34.7150259067358, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI19923669, Length=142, Percent_Identity=34.5070422535211, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI154689719, Length=163, Percent_Identity=31.2883435582822, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI87081769, Length=204, Percent_Identity=32.843137254902, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1786867, Length=109, Percent_Identity=32.1100917431193, Blast_Score=64, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17563256, Length=209, Percent_Identity=28.2296650717703, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355295, Length=229, Percent_Identity=30.1310043668122, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 29023; Mature: 28892

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYASKLALKICLASLCLFSALGAEHLEQKGNYIYKGEEAYNNREYERAASFYKSAIKNG
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHCCC
EPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGRGVTKDEKK
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHH
AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIY
HHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLSESYRYGLGVEKDKQKAEEYMQKAC
ECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
DFDIDKNCKKKNTSSR
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYASKLALKICLASLCLFSALGAEHLEQKGNYIYKGEEAYNNREYERAASFYKSAIKNG
CHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHCCC
EPLAYVLLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGRGVTKDEKK
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHH
AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIY
HHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLSESYRYGLGVEKDKQKAEEYMQKAC
ECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
DFDIDKNCKKKNTSSR
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]