Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527899

Identifier: 188527899

GI number: 188527899

Start: 1134830

End: 1134919

Strand: Reverse

Name: 188527899

Synonym: HPSH_05750

Alternate gene names: NA

Gene position: 1134919-1134830 (Counterclockwise)

Preceding gene: 188527900

Following gene: 188527898

Centisome position: 70.56

GC content: 36.67

Gene sequence:

>90_bases
ATGTTTGCTGGTTTTGGAACGCATGCAGTTTCTTTTTTAAGATTGGTAGCCATTGGCATTATGTTTGATCTTGTTAAAGC
AGAGGAGTAA

Upstream 100 bases:

>100_bases
ATCTTAAATTTAGTTTTAAATTCATAAAAATAGTGTAAAATTTCTCATTACAAGAGACGATACTAGATCTAAATGGGTGT
ATACAGAATGGAGTTTGAGA

Downstream 100 bases:

>100_bases
CAATGGGATACGCAAGCAAATTAGCCTTGAAGATTTGTTTGGCGAGTTTATGTTTATTTAGTGCTCTTGGTGCAGAACAC
CTTGAACAAAAAGGGAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 29; Mature: 29

Protein sequence:

>29_residues
MFAGFGTHAVSFLRLVAIGIMFDLVKAEE

Sequences:

>Translated_29_residues
MFAGFGTHAVSFLRLVAIGIMFDLVKAEE
>Mature_29_residues
MFAGFGTHAVSFLRLVAIGIMFDLVKAEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3171; Mature: 3171

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGFGTHAVSFLRLVAIGIMFDLVKAEE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAGFGTHAVSFLRLVAIGIMFDLVKAEE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA