| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527899
Identifier: 188527899
GI number: 188527899
Start: 1134830
End: 1134919
Strand: Reverse
Name: 188527899
Synonym: HPSH_05750
Alternate gene names: NA
Gene position: 1134919-1134830 (Counterclockwise)
Preceding gene: 188527900
Following gene: 188527898
Centisome position: 70.56
GC content: 36.67
Gene sequence:
>90_bases ATGTTTGCTGGTTTTGGAACGCATGCAGTTTCTTTTTTAAGATTGGTAGCCATTGGCATTATGTTTGATCTTGTTAAAGC AGAGGAGTAA
Upstream 100 bases:
>100_bases ATCTTAAATTTAGTTTTAAATTCATAAAAATAGTGTAAAATTTCTCATTACAAGAGACGATACTAGATCTAAATGGGTGT ATACAGAATGGAGTTTGAGA
Downstream 100 bases:
>100_bases CAATGGGATACGCAAGCAAATTAGCCTTGAAGATTTGTTTGGCGAGTTTATGTTTATTTAGTGCTCTTGGTGCAGAACAC CTTGAACAAAAAGGGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 29; Mature: 29
Protein sequence:
>29_residues MFAGFGTHAVSFLRLVAIGIMFDLVKAEE
Sequences:
>Translated_29_residues MFAGFGTHAVSFLRLVAIGIMFDLVKAEE >Mature_29_residues MFAGFGTHAVSFLRLVAIGIMFDLVKAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3171; Mature: 3171
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAGFGTHAVSFLRLVAIGIMFDLVKAEE CCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFAGFGTHAVSFLRLVAIGIMFDLVKAEE CCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA