Click here to switch to the map view.

The map label for this gene is 188527893

Identifier: 188527893

GI number: 188527893

Start: 1129095

End: 1129928

Strand: Direct

Name: 188527893

Synonym: HPSH_05720

Alternate gene names: NA

Gene position: 1129095-1129928 (Clockwise)

Preceding gene: 188527892

Following gene: 188527904

Centisome position: 70.19

GC content: 38.85

Gene sequence:

>834_bases
TTGAAACGAGCGTTATGTTTGATTTTAGGGCTTTTTTGCGCGCTTAATGCAAAGGGTTTTAAAGATGTTTTGACTAAAGG
GGATTACACTTTTTTTAACAAAAAGGTGGTTTCGCCCATCAAACGCTATGCGGATAGATCAGCGTTTTATCTGGGGCTTG
GGTATCAATTAGGGAGCATTCAGCGCAACTCTAGCAACTTGAATTTATTCCAAAACTTCACCAAAACCCAAATCATTTTC
AGCGATGGCTTAAGCCCTGTTTTTAAAAATTCGTATGTGTCTAATGGCCTTGGCGTGCAAGTGGGCCATAAATGGGTGGG
TAAGCATGAAGAAACGAAGTGGTTTGGTTTCAGGTGGGGGCTATTTTATGATTTGAGCGCTTCTCTTTATGGTCTAAAAG
AATCGCAGTCCATTCTCATTTCCACTTACGGCACTTATATGGATTTATTATTTAACGCTTATAATGGGGATAAGTTTTTT
GCCGGGTTCAATTTGGGGATTGCTTTTGCTGGAGTGTATAATAAATTAAGCGATGCATTATTGTATCAAACGCTTCTTCA
AGACGCTTTTGGCGGGAAAGTGGATCCAAATGGCTTCCAGTTTTTGGTGGATTTAGGGGTTCGTTTAGGGAATGAGCGCA
ACCAATTTGGCTTTGGGATTAAAATCCCTACTTATTATTTTAACCACTATTATTCCATGAATAACATTAGCAATAATAGT
GGAGATGTCCTAAAGGTTTTACGATTTTTAGAATACGGGATCAACAGCGTGTTGTATCGGGTTGATTTCAGGCGCAATTA
CTCGGTTTATTTCAACTACGCTTATAGTTTTTAA

Upstream 100 bases:

>100_bases
TGGGGGCGATTTTTAAAAGGGTGTTTGAATAGGGTGCGTTTTCACAAAAACAAAACTACAATAAGCGCTAAAAAATTAAA
GTTTTAAATTAAGGGGTTTT

Downstream 100 bases:

>100_bases
AGCGTTCTTAATTTAGCGATTTCGTCTCTCAAATGCATCGCTTCTTCAAAATCCAAATTTTTCGCGCATTCTCGCATTTT
TTTATCCAGTTCTTTAATGA

Product: outer membrane protein Horl

Products: NA

Alternate protein names: Outer Membrane Protein Horl; Outer Membrane Protein HorF; Outer Membrane Protein HorI

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKRALCLILGLFCALNAKGFKDVLTKGDYTFFNKKVVSPIKRYADRSAFYLGLGYQLGSIQRNSSNLNLFQNFTKTQIIF
SDGLSPVFKNSYVSNGLGVQVGHKWVGKHEETKWFGFRWGLFYDLSASLYGLKESQSILISTYGTYMDLLFNAYNGDKFF
AGFNLGIAFAGVYNKLSDALLYQTLLQDAFGGKVDPNGFQFLVDLGVRLGNERNQFGFGIKIPTYYFNHYYSMNNISNNS
GDVLKVLRFLEYGINSVLYRVDFRRNYSVYFNYAYSF

Sequences:

>Translated_277_residues
MKRALCLILGLFCALNAKGFKDVLTKGDYTFFNKKVVSPIKRYADRSAFYLGLGYQLGSIQRNSSNLNLFQNFTKTQIIF
SDGLSPVFKNSYVSNGLGVQVGHKWVGKHEETKWFGFRWGLFYDLSASLYGLKESQSILISTYGTYMDLLFNAYNGDKFF
AGFNLGIAFAGVYNKLSDALLYQTLLQDAFGGKVDPNGFQFLVDLGVRLGNERNQFGFGIKIPTYYFNHYYSMNNISNNS
GDVLKVLRFLEYGINSVLYRVDFRRNYSVYFNYAYSF
>Mature_277_residues
MKRALCLILGLFCALNAKGFKDVLTKGDYTFFNKKVVSPIKRYADRSAFYLGLGYQLGSIQRNSSNLNLFQNFTKTQIIF
SDGLSPVFKNSYVSNGLGVQVGHKWVGKHEETKWFGFRWGLFYDLSASLYGLKESQSILISTYGTYMDLLFNAYNGDKFF
AGFNLGIAFAGVYNKLSDALLYQTLLQDAFGGKVDPNGFQFLVDLGVRLGNERNQFGFGIKIPTYYFNHYYSMNNISNNS
GDVLKVLRFLEYGINSVLYRVDFRRNYSVYFNYAYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31650; Mature: 31650

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALCLILGLFCALNAKGFKDVLTKGDYTFFNKKVVSPIKRYADRSAFYLGLGYQLGSI
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEEEECCEECCE
QRNSSNLNLFQNFTKTQIIFSDGLSPVFKNSYVSNGLGVQVGHKWVGKHEETKWFGFRWG
ECCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEECCHHCCCCCCCEEEEEEEC
LFYDLSASLYGLKESQSILISTYGTYMDLLFNAYNGDKFFAGFNLGIAFAGVYNKLSDAL
EEEECCCHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
LYQTLLQDAFGGKVDPNGFQFLVDLGVRLGNERNQFGFGIKIPTYYFNHYYSMNNISNNS
HHHHHHHHHCCCCCCCCHHHHHEEHHHHCCCCCCCCEEEEECCCEEEHEEEEECCCCCCC
GDVLKVLRFLEYGINSVLYRVDFRRNYSVYFNYAYSF
HHHHHHHHHHHHCHHHEEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MKRALCLILGLFCALNAKGFKDVLTKGDYTFFNKKVVSPIKRYADRSAFYLGLGYQLGSI
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEEEECCEECCE
QRNSSNLNLFQNFTKTQIIFSDGLSPVFKNSYVSNGLGVQVGHKWVGKHEETKWFGFRWG
ECCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEECCHHCCCCCCCEEEEEEEC
LFYDLSASLYGLKESQSILISTYGTYMDLLFNAYNGDKFFAGFNLGIAFAGVYNKLSDAL
EEEECCCHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
LYQTLLQDAFGGKVDPNGFQFLVDLGVRLGNERNQFGFGIKIPTYYFNHYYSMNNISNNS
HHHHHHHHHCCCCCCCCHHHHHEEHHHHCCCCCCCCEEEEECCCEEEHEEEEECCCCCCC
GDVLKVLRFLEYGINSVLYRVDFRRNYSVYFNYAYSF
HHHHHHHHHHHHCHHHEEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA