| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527809
Identifier: 188527809
GI number: 188527809
Start: 1030685
End: 1030963
Strand: Reverse
Name: 188527809
Synonym: HPSH_05245
Alternate gene names: NA
Gene position: 1030963-1030685 (Counterclockwise)
Preceding gene: 188527810
Following gene: 188527808
Centisome position: 64.09
GC content: 35.84
Gene sequence:
>279_bases ATGGATGTCCATGTTAATGCTGATGAATTGGAAAAATTCGCACGCGAGATTAAAAGTTTTTTAGACACGCAACAAAACGC AACTTCTAGATTAAGAGGAGCGTTTAATCGTGTGAAAAGTTCTTGGCAAGATAATAAGTGTAAAGAGTTTGAAAACAATT TTTCAGATCTTGTAAATAGGCTTCTTAGGTTTAATGAGTTAGTGCAAGGCGATATCAATCATCTTAAAAAGCTTATCGCC ATGCAGAGAGAATATGAAAGGACGCGTCATGGTCGTTAA
Upstream 100 bases:
>100_bases GTTGTTTGAAATCATGACTCAAACCATTAGCAAGGGTTCTACTTCAATTAAAGATGATCTAGATTCCATGATGAATGATT TAAAATAAGGAGATAGGTTT
Downstream 100 bases:
>100_bases GGAGTGTTTATGCAAAGTTCCATAAAAAGTCTTGATGGTTTAAAGACAAGCGTTCAGGCTTTGAATAATGTGCAAGAGCG AGTGAGAGAAAATTTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MDVHVNADELEKFAREIKSFLDTQQNATSRLRGAFNRVKSSWQDNKCKEFENNFSDLVNRLLRFNELVQGDINHLKKLIA MQREYERTRHGR
Sequences:
>Translated_92_residues MDVHVNADELEKFAREIKSFLDTQQNATSRLRGAFNRVKSSWQDNKCKEFENNFSDLVNRLLRFNELVQGDINHLKKLIA MQREYERTRHGR >Mature_92_residues MDVHVNADELEKFAREIKSFLDTQQNATSRLRGAFNRVKSSWQDNKCKEFENNFSDLVNRLLRFNELVQGDINHLKKLIA MQREYERTRHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10997; Mature: 10997
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVHVNADELEKFAREIKSFLDTQQNATSRLRGAFNRVKSSWQDNKCKEFENNFSDLVNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLRFNELVQGDINHLKKLIAMQREYERTRHGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDVHVNADELEKFAREIKSFLDTQQNATSRLRGAFNRVKSSWQDNKCKEFENNFSDLVNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLRFNELVQGDINHLKKLIAMQREYERTRHGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA