| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is yegL [C]
Identifier: 188527810
GI number: 188527810
Start: 1030976
End: 1031629
Strand: Reverse
Name: yegL [C]
Synonym: HPSH_05250
Alternate gene names: 188527810
Gene position: 1031629-1030976 (Counterclockwise)
Preceding gene: 188527811
Following gene: 188527809
Centisome position: 64.13
GC content: 35.17
Gene sequence:
>654_bases ATGGCATTAGATTTAAGTAAATACACTATGGAAGAACGCTTTATTCCAGTATTTTTATTGTTAGATACGAGTGGTTCGAT GAATGAGTCTTTGGGTAATTGCACACGCATTGAAGCACTTAATCTTTGTATTCAAAAAATGATAGAAACTTTAAAGCAAG AAGCTAAAAAAGAGTTGTTTAGCAAAATGGCTATTATTACTTTTGGTGAAAATGGCGCGGTTTTGCACACGCCCTTTGAT GATGTAAAAAACATCAATTTTAAGCCTTTAAGCGCGAGTGGTGGCACCCCTTTAGATCAAGCGTTTAGATTGGCTAAGGA TCTTATTGAAGATAAAGACACTTTCCCTACTAAATTCTATAAACTTTATAGCATTTTAGTCTCGGATGGTGAGCCAAATG ATGATAAATGGCAAAAGGCTTTATCTAACTTCCACCATGATGGAAGAAGCGCTAAAAGTGTGTGTTGGAGCATTTTTATT GGTGATAGAAATACCAACCCGCAAGTTAATAAGGATTTTGGCAAAGATGGCGTATTTTACGCAGATGATGTGGAAAAGTT AGTGGGGTTGTTTGAAATCATGACTCAAACCATTAGCAAGGGTTCTACTTCAATTAAAGATGATCTAGATTCCATGATGA ATGATTTAAAATAA
Upstream 100 bases:
>100_bases GGCTTGCACCCCAAAATTCGGGCAGATCTTAAGCTAAGCCTAAGCCTACTATACTCAAAAGTCTATAAAATCATCAAAAA GAGTGCTGAAAGGAGATATT
Downstream 100 bases:
>100_bases GGAGATAGGTTTATGGATGTCCATGTTAATGCTGATGAATTGGAAAAATTCGCACGCGAGATTAAAAGTTTTTTAGACAC GCAACAAAACGCAACTTCTA
Product: phage/colicin/tellurite resistance cluster terY protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A; Phage/Colicin/Tellurite Resistance Cluster Protein TerY; Tellurium Resistance Protein
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MALDLSKYTMEERFIPVFLLLDTSGSMNESLGNCTRIEALNLCIQKMIETLKQEAKKELFSKMAIITFGENGAVLHTPFD DVKNINFKPLSASGGTPLDQAFRLAKDLIEDKDTFPTKFYKLYSILVSDGEPNDDKWQKALSNFHHDGRSAKSVCWSIFI GDRNTNPQVNKDFGKDGVFYADDVEKLVGLFEIMTQTISKGSTSIKDDLDSMMNDLK
Sequences:
>Translated_217_residues MALDLSKYTMEERFIPVFLLLDTSGSMNESLGNCTRIEALNLCIQKMIETLKQEAKKELFSKMAIITFGENGAVLHTPFD DVKNINFKPLSASGGTPLDQAFRLAKDLIEDKDTFPTKFYKLYSILVSDGEPNDDKWQKALSNFHHDGRSAKSVCWSIFI GDRNTNPQVNKDFGKDGVFYADDVEKLVGLFEIMTQTISKGSTSIKDDLDSMMNDLK >Mature_216_residues ALDLSKYTMEERFIPVFLLLDTSGSMNESLGNCTRIEALNLCIQKMIETLKQEAKKELFSKMAIITFGENGAVLHTPFDD VKNINFKPLSASGGTPLDQAFRLAKDLIEDKDTFPTKFYKLYSILVSDGEPNDDKWQKALSNFHHDGRSAKSVCWSIFIG DRNTNPQVNKDFGKDGVFYADDVEKLVGLFEIMTQTISKGSTSIKDDLDSMMNDLK
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24415; Mature: 24284
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDLSKYTMEERFIPVFLLLDTSGSMNESLGNCTRIEALNLCIQKMIETLKQEAKKELF CCCCCHHHHHHHCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SKMAIITFGENGAVLHTPFDDVKNINFKPLSASGGTPLDQAFRLAKDLIEDKDTFPTKFY HHHEEEEECCCCCEEECCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH KLYSILVSDGEPNDDKWQKALSNFHHDGRSAKSVCWSIFIGDRNTNPQVNKDFGKDGVFY HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCEE ADDVEKLVGLFEIMTQTISKGSTSIKDDLDSMMNDLK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ALDLSKYTMEERFIPVFLLLDTSGSMNESLGNCTRIEALNLCIQKMIETLKQEAKKELF CCCCHHHHHHHCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SKMAIITFGENGAVLHTPFDDVKNINFKPLSASGGTPLDQAFRLAKDLIEDKDTFPTKFY HHHEEEEECCCCCEEECCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH KLYSILVSDGEPNDDKWQKALSNFHHDGRSAKSVCWSIFIGDRNTNPQVNKDFGKDGVFY HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCEE ADDVEKLVGLFEIMTQTISKGSTSIKDDLDSMMNDLK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA