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The map label for this gene is gpsA

Identifier: 188527782

GI number: 188527782

Start: 1001405

End: 1002343

Strand: Reverse

Name: gpsA

Synonym: HPSH_05065

Alternate gene names: 188527782

Gene position: 1002343-1001405 (Counterclockwise)

Preceding gene: 188527783

Following gene: 188527781

Centisome position: 62.31

GC content: 44.41

Gene sequence:

>939_bases
ATGGAAATTGCAGTATTTGGTGGCGGGGCGTGGGGGAGGGCTTTAGCCTTTGCTTTTGGAGAAAAGAATGAAGTCAAAAT
CATTTCAAGGCGCGATCTAAACGAGCCGTTAAAAAAGCTCAATGACGCTTTGATTTCTAAAGGTTCTGCCCCCATAGAGC
AAGTGGATTTACAAAGAGGCTTAAAAGCAGTGCTCTATGTCATCGCTATTAGCGTGCAGCATTTAAGGGAATGGTTTCAA
AACGCTTCTTTACCCAAAAACGCTAAGGTTTTAATCGCTTCTAAAGGGATAGAGGTTTTAAACAGGGCGTTTGTGAGCGA
GATCGCAAAGGATTTTATCGATCCTAATTCTTTGTGTTTTTTAGCGGGTCCGAGTTTTGCGGCTGAAATCATTCAAGGCC
TGCCTTGCGCGTTAGTCATTCATTCTAATAATCAGGCTTTAGCGCTAGAATTTGCCAATAAAACCCCCTCTTTTATCAGA
GCCTACGCCCAACAAGACATCATAGGGGGTGAAATCGCTGGCGCGTATAAAAATGTGATAGCCATTGCTGGGGGGGTTTG
TGATGGCTTGAAATTAGGCAATAGCGCTAAAGCGAGTTTATTGTCTAGGGGTTTGGTGGAAATGCAACGCTTTGGGGCGT
TCTTTGGGGGCAAGACGGAGACTTTTTTAGGGCTTTCTGGGGCTGGGGATTTGTTTTTAACCGCTAATTCTATTTTATCT
AGGAATTATCGTGTGGGTTTGGGGCTAGCCCAAAACAAGCCTTTAGAGGTGGTTTTAGAAGAATTAGGCGAAGTGGCTGA
AGGGGTGAAAACGACCAACGCCATTGTGGAAATCGCTAGAAAATACGGCATTTATACGCCCATTGCGAGCGAATTAGCCT
TGCTTTTAAAGGGTAAGAGTGTGCTAGAGAGCATGAACGATTTGATCAGACGCGCTTAA

Upstream 100 bases:

>100_bases
TAAAGACCGCATGCTTTGCGCCAAAGATTTGCTATAAGGGCTATTTTAAACTTATTATTGTAAAATGGTGAGTTTTACAA
TCAATGAGATTAGGAATTTA

Downstream 100 bases:

>100_bases
AAGGAAAGAGAGCATGCAAGATTTTTCAAGTTTATTATTAAAATTACAAGAGTATTGGAAGAATCAAGGTTGTTTGGTGA
TTCAGCCTTATGATATTCCT

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEIAVFGGGAWGRALAFAFGEKNEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRGLKAVLYVIAISVQHLREWFQ
NASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTPSFIR
AYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILS
RNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKSVLESMNDLIRRA

Sequences:

>Translated_312_residues
MEIAVFGGGAWGRALAFAFGEKNEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRGLKAVLYVIAISVQHLREWFQ
NASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTPSFIR
AYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILS
RNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKSVLESMNDLIRRA
>Mature_312_residues
MEIAVFGGGAWGRALAFAFGEKNEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRGLKAVLYVIAISVQHLREWFQ
NASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTPSFIR
AYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILS
RNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKSVLESMNDLIRRA

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=324, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI33695088, Length=172, Percent_Identity=31.9767441860465, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1790037, Length=326, Percent_Identity=30.9815950920245, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 33418; Mature: 33418

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIAVFGGGAWGRALAFAFGEKNEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRG
CEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKAVLYVIAISVQHLREWFQNASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEE
LAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTPSFIRAYAQQDIIGGEIAGAYKNVI
EECCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHH
AIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILS
HHHCCHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHC
RNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKS
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
VLESMNDLIRRA
HHHHHHHHHHCC
>Mature Secondary Structure
MEIAVFGGGAWGRALAFAFGEKNEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRG
CEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKAVLYVIAISVQHLREWFQNASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEE
LAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTPSFIRAYAQQDIIGGEIAGAYKNVI
EECCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHH
AIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILS
HHHCCHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHC
RNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKS
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
VLESMNDLIRRA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA