| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527783
Identifier: 188527783
GI number: 188527783
Start: 1002373
End: 1002522
Strand: Reverse
Name: 188527783
Synonym: HPSH_05070
Alternate gene names: NA
Gene position: 1002522-1002373 (Counterclockwise)
Preceding gene: 188527784
Following gene: 188527782
Centisome position: 62.32
GC content: 34.0
Gene sequence:
>150_bases ATGATGTTTATAATAAAACTTATCCAGAAGATCTTCAAAAAAAAAGGGGGAGAAGGAGATCAAAAAGATAGCCCACGCAT AAAGACCGCATGCTTTGCGCCAAAGATTTGCTATAAGGGCTATTTTAAACTTATTATTGTAAAATGGTGA
Upstream 100 bases:
>100_bases TAAAGCATTCAATAGATGCAAAAAACAAATGGATGAGTGTAATGATTTGCTCCGATTGGACTATTCTTCAGAAATTTAAA ACGACTCGAGCAATTCAAAA
Downstream 100 bases:
>100_bases GTTTTACAATCAATGAGATTAGGAATTTAATGGAAATTGCAGTATTTGGTGGCGGGGCGTGGGGGAGGGCTTTAGCCTTT GCTTTTGGAGAAAAGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MMFIIKLIQKIFKKKGGEGDQKDSPRIKTACFAPKICYKGYFKLIIVKW
Sequences:
>Translated_49_residues MMFIIKLIQKIFKKKGGEGDQKDSPRIKTACFAPKICYKGYFKLIIVKW >Mature_49_residues MMFIIKLIQKIFKKKGGEGDQKDSPRIKTACFAPKICYKGYFKLIIVKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5753; Mature: 5753
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFIIKLIQKIFKKKGGEGDQKDSPRIKTACFAPKICYKGYFKLIIVKW CCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCHHHHCCEEEEEEEEC >Mature Secondary Structure MMFIIKLIQKIFKKKGGEGDQKDSPRIKTACFAPKICYKGYFKLIIVKW CCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCHHHHCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA