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The map label for this gene is flgD

Identifier: 188527732

GI number: 188527732

Start: 940125

End: 941099

Strand: Direct

Name: flgD

Synonym: HPSH_04775

Alternate gene names: 188527732

Gene position: 940125-941099 (Clockwise)

Preceding gene: 188527731

Following gene: 188527733

Centisome position: 58.45

GC content: 40.82

Gene sequence:

>975_bases
ATGGCCATTGATTTAGCAGAAGTTACAGGAGCTAAAGCCGCACAAGAAAGGAAAAAAGAACAGCCCGCAATCGCTAACGG
GTTGGATAAAAACGCTTTTCTGAAACTCTTTTTAGAGCAATTGAAAAATCAAGACCCCACCGCTCCTATGGAAACGGACA
AGATCATCACCCAAACCGCGCAACTCACGCAAGTGGAAATGCAAGAAGAAAACAAAAAAACCATGCAAGAAGTCGCAAGT
GCCATGAAATCCAATAAAGAAACTAACGAGTCTTTAAAAGACTTTCAAGGCGCTTTAAAAGACACCATGGAAAACCTTAA
TAAAGGCATGGACGATAGCCTAAAGGCTAATAACGCTTTAAGGGAAGTGAGTGCACTCAATTCTGTAAGCATGATAGGCA
AAATCGCTGAAACCGATGTGAGCGGGGCGAATTTTGATGGCAACAATAAGCTTTCTTTTTCGCTCTTTTTTGATGAAAAA
ATTGACGCTTCTAAAGGAGTGCCAGCGATTCAAATCCTGAATGAAAACAATGAATTAGTCAAAACGATTCCTTTAAAAGA
TTATAACGGGCAAAAGGGGTATATCAATTTTGAATGGGACGGCTTGAACGAAAAGGGCGAAAAAGTCCCTAAAGGCAATT
ATAAAATCAAGGCTGAATACAATTTAGACTCCCAAAGCAAGCAGTATTTGCAAACGCGCATCGGTAGGGGCGAAGTGGAA
AGCGTGATTTTTGATAAAGGCAAGCCCATGCTGAGAATGGGCGAAATGGTTTTACCTATAGACAGCGCGATAGAGTTTTA
TAAACCGGATCAAAAGCCGCTTGAACAAAAACCGCTTGAACAAAAACTCTCTGATCAAAAGCCACTTGATCAAAAACTCT
CTGAACAAAAGCCTCAAGAACCGCTTGATCAAAAACTCTCTGATCAAAAACTCTCTGATCAAAAACCCCAAACCCCCTCT
AAAGAGACAGCATGA

Upstream 100 bases:

>100_bases
CGGATAATGAAAACCAAGAAACGAGCATGCAAATCACTCTTTATGCGTGATTTTAAGCAAGTTTGCTCTATAATAGGACA
TCTTTAATAAGGAAGAGATC

Downstream 100 bases:

>100_bases
ACGACACCTTATTAAACGCTTACAGCGGGATTAAGACCCACCAGTTTGGCATTGACAGCCTTTCAAACAATATCGCCAAT
GTCAATACTTTAGGCTATCG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; Flagellar Biosynthesis Protein; Flagellar Hook Assembly Protein FlgD; Flagellar-Hook Assembly Protein FlgD; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MAIDLAEVTGAKAAQERKKEQPAIANGLDKNAFLKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVAS
AMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEK
IDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGLNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
SVIFDKGKPMLRMGEMVLPIDSAIEFYKPDQKPLEQKPLEQKLSDQKPLDQKLSEQKPQEPLDQKLSDQKLSDQKPQTPS
KETA

Sequences:

>Translated_324_residues
MAIDLAEVTGAKAAQERKKEQPAIANGLDKNAFLKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVAS
AMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEK
IDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGLNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
SVIFDKGKPMLRMGEMVLPIDSAIEFYKPDQKPLEQKPLEQKLSDQKPLDQKLSEQKPQEPLDQKLSDQKLSDQKPQTPS
KETA
>Mature_323_residues
AIDLAEVTGAKAAQERKKEQPAIANGLDKNAFLKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASA
MKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKI
DASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGLNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVES
VIFDKGKPMLRMGEMVLPIDSAIEFYKPDQKPLEQKPLEQKLSDQKPLDQKLSEQKPQEPLDQKLSDQKLSDQKPQTPSK
ETA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36320; Mature: 36189

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDLAEVTGAKAAQERKKEQPAIANGLDKNAFLKLFLEQLKNQDPTAPMETDKIITQTA
CCCCCHHHHCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEE
KTIPLKDYNGQKGYINFEWDGLNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHH
SVIFDKGKPMLRMGEMVLPIDSAIEFYKPDQKPLEQKPLEQKLSDQKPLDQKLSEQKPQE
HHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCCHHCCHHHHHHCCCCCHHHHHHHCCCCC
PLDQKLSDQKLSDQKPQTPSKETA
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AIDLAEVTGAKAAQERKKEQPAIANGLDKNAFLKLFLEQLKNQDPTAPMETDKIITQTA
CCCCHHHHCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEE
KTIPLKDYNGQKGYINFEWDGLNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHH
SVIFDKGKPMLRMGEMVLPIDSAIEFYKPDQKPLEQKPLEQKLSDQKPLDQKLSEQKPQE
HHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCCHHCCHHHHHHCCCCCHHHHHHHCCCCC
PLDQKLSDQKLSDQKPQTPSKETA
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA