| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188527714
Identifier: 188527714
GI number: 188527714
Start: 925190
End: 925345
Strand: Reverse
Name: 188527714
Synonym: HPSH_04680
Alternate gene names: NA
Gene position: 925345-925190 (Counterclockwise)
Preceding gene: 188527715
Following gene: 188527710
Centisome position: 57.53
GC content: 37.18
Gene sequence:
>156_bases TTGCACACTTCCTACGCTAGATACAAATGTATGGGGTATTATAACAAATTAGTGGCATTCATCCCAAACACTAAAGATGT TTGGGATTTCTGCTTGGGTGGTTTTAAATGTTATTTCTTAAGAAACCCATGCCAAAGCATGGGTTTTAGAGCTTAG
Upstream 100 bases:
>100_bases GGGGAGAGTTTGGTTTTCACTCTGTGTCCCTAATGGATTTTACAGGGTTTGATCTCCAACGCATTCGGTCTCACACATCA TATCTTATAAAGGCATAACT
Downstream 100 bases:
>100_bases AAACTATACCTCATTCCTAAATTGGAAGCGAAATGGCTTGCGTTGGAAATCAAGTTGTGCAAATAAATAAAGCCCAAATT CAAAAACACTTCTTTAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MHTSYARYKCMGYYNKLVAFIPNTKDVWDFCLGGFKCYFLRNPCQSMGFRA
Sequences:
>Translated_51_residues MHTSYARYKCMGYYNKLVAFIPNTKDVWDFCLGGFKCYFLRNPCQSMGFRA >Mature_51_residues MHTSYARYKCMGYYNKLVAFIPNTKDVWDFCLGGFKCYFLRNPCQSMGFRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6044; Mature: 6044
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 13.7 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 13.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTSYARYKCMGYYNKLVAFIPNTKDVWDFCLGGFKCYFLRNPCQSMGFRA CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCHHHCCCCC >Mature Secondary Structure MHTSYARYKCMGYYNKLVAFIPNTKDVWDFCLGGFKCYFLRNPCQSMGFRA CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA