Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527672

Identifier: 188527672

GI number: 188527672

Start: 873916

End: 874311

Strand: Reverse

Name: 188527672

Synonym: HPSH_04470

Alternate gene names: NA

Gene position: 874311-873916 (Counterclockwise)

Preceding gene: 188527673

Following gene: 188527668

Centisome position: 54.35

GC content: 35.35

Gene sequence:

>396_bases
ATGCAATACCCTAACCTACCTAATAGCGTGCTAGATTTCATACAACAGCCCGAAGTCAAAGAAATCACTAACGAACTTTT
AAAGCAACTACAAAGCGCTTTAAATTCTAATAGTCTTTTTACGGATCAAGTGGAATTAAGCCTTAAAGGAATTGTAAGGA
TTTTAGAAGTGCTTTTGAGTTTGGATTTTTTCAAAAACGCCAACGAGATTGATAGCAGTTTGAGAAACTCCATTGAATGG
CTTAATAACGCCGGCGAGAGCTTGAAAGAAAAAATGAAAGAATACGAGAGCTTTTTTAATGATTTCAATACGAGCATGAA
AGCGAACGAGCAAGAAGTAACCGATACACTAAACGCTAACACCCAAAACATTTTTTATTTAAAAAGGGCTGTATAA

Upstream 100 bases:

>100_bases
AGCGCTAAAGGACATGCAAAAAGAAAGCGAGAAAGGGATAAAAGGACAAAAATTTGAAACGCCTAATCCTAACATAAAAA
AGTGAATAAAAGGAAACCCC

Downstream 100 bases:

>100_bases
ATCACAAGGAAATGTAATCCACTTCTTTGGGTCTTTGATGGCTAGCGATGAGTTGCTTACAGGTTGCAACGCCTTCCGAA
GTGCCAACCATTAATAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MQYPNLPNSVLDFIQQPEVKEITNELLKQLQSALNSNSLFTDQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEW
LNNAGESLKEKMKEYESFFNDFNTSMKANEQEVTDTLNANTQNIFYLKRAV

Sequences:

>Translated_131_residues
MQYPNLPNSVLDFIQQPEVKEITNELLKQLQSALNSNSLFTDQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEW
LNNAGESLKEKMKEYESFFNDFNTSMKANEQEVTDTLNANTQNIFYLKRAV
>Mature_131_residues
MQYPNLPNSVLDFIQQPEVKEITNELLKQLQSALNSNSLFTDQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEW
LNNAGESLKEKMKEYESFFNDFNTSMKANEQEVTDTLNANTQNIFYLKRAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15113; Mature: 15113

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPNLPNSVLDFIQQPEVKEITNELLKQLQSALNSNSLFTDQVELSLKGIVRILEVLLS
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LDFFKNANEIDSSLRNSIEWLNNAGESLKEKMKEYESFFNDFNTSMKANEQEVTDTLNAN
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
TQNIFYLKRAV
CCHHHHHHHCC
>Mature Secondary Structure
MQYPNLPNSVLDFIQQPEVKEITNELLKQLQSALNSNSLFTDQVELSLKGIVRILEVLLS
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LDFFKNANEIDSSLRNSIEWLNNAGESLKEKMKEYESFFNDFNTSMKANEQEVTDTLNAN
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
TQNIFYLKRAV
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA