Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527673

Identifier: 188527673

GI number: 188527673

Start: 874327

End: 874701

Strand: Reverse

Name: 188527673

Synonym: HPSH_04475

Alternate gene names: NA

Gene position: 874701-874327 (Counterclockwise)

Preceding gene: 188527675

Following gene: 188527672

Centisome position: 54.38

GC content: 34.93

Gene sequence:

>375_bases
ATGTTTGAAAAGAGCGATCAAAATACAAGCGATATAAGCGAGATTTTAGGAGGAGCGATCGCGCGCTTTGCGAGGTTTGA
TGATCCTTCTAAAGCGTTATTTGAAGCCTTAAGAAATGATAACATTGAAAAAGGTTTGAAAGAATTTAAGATCGCAGATG
TTACTAAGGATATGTTTGATCCTAATAGCAAGGAATTTAAGGATATTGATATTTACGACTTTACGCATTATCTTTTAATG
GTGAATAGAGAGCCGAATGAGAATAATCCAGTTTTAAAGCGCTTGATAGAAGCGCTAAAGGACATGCAAAAAGAAAGCGA
GAAAGGGATAAAAGGACAAAAATTTGAAACGCCTAATCCTAACATAAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTTTAAAAATTTATGGTAGAATACAAAGATAGTTTTTAGAAAGTTAGAATTAGAAAATTAAGAAGCTTAGAGCTAACTG
AATAATTACATTCTTTAGAA

Downstream 100 bases:

>100_bases
ATAAAAGGAAACCCCATGCAATACCCTAACCTACCTAATAGCGTGCTAGATTTCATACAACAGCCCGAAGTCAAAGAAAT
CACTAACGAACTTTTAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MFEKSDQNTSDISEILGGAIARFARFDDPSKALFEALRNDNIEKGLKEFKIADVTKDMFDPNSKEFKDIDIYDFTHYLLM
VNREPNENNPVLKRLIEALKDMQKESEKGIKGQKFETPNPNIKK

Sequences:

>Translated_124_residues
MFEKSDQNTSDISEILGGAIARFARFDDPSKALFEALRNDNIEKGLKEFKIADVTKDMFDPNSKEFKDIDIYDFTHYLLM
VNREPNENNPVLKRLIEALKDMQKESEKGIKGQKFETPNPNIKK
>Mature_124_residues
MFEKSDQNTSDISEILGGAIARFARFDDPSKALFEALRNDNIEKGLKEFKIADVTKDMFDPNSKEFKDIDIYDFTHYLLM
VNREPNENNPVLKRLIEALKDMQKESEKGIKGQKFETPNPNIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14358; Mature: 14358

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKSDQNTSDISEILGGAIARFARFDDPSKALFEALRNDNIEKGLKEFKIADVTKDMFD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PNSKEFKDIDIYDFTHYLLMVNREPNENNPVLKRLIEALKDMQKESEKGIKGQKFETPNP
CCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NIKK
CCCC
>Mature Secondary Structure
MFEKSDQNTSDISEILGGAIARFARFDDPSKALFEALRNDNIEKGLKEFKIADVTKDMFD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PNSKEFKDIDIYDFTHYLLMVNREPNENNPVLKRLIEALKDMQKESEKGIKGQKFETPNP
CCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NIKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA