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The map label for this gene is 188527644

Identifier: 188527644

GI number: 188527644

Start: 845087

End: 845917

Strand: Direct

Name: 188527644

Synonym: HPSH_04330

Alternate gene names: NA

Gene position: 845087-845917 (Clockwise)

Preceding gene: 188527639

Following gene: 188527651

Centisome position: 52.54

GC content: 36.94

Gene sequence:

>831_bases
ATGTTTAAAGATTTTTATCGCACCACTTTCTCTTTTTTAAAGCCTTTATTGCTTTTATTGTGTTTATTGTTGCCGTTTTC
GCTTCATGCAGATTCAGATGATTGCAGGATAACTTGTGTTTGGGATCAATACGCAAAGGAATTTAAGACAAATTTTTGTA
AATTTGGGTTAAACAATCTTAATTACGGCCAATACAAGCAAGCTTTCCAATTTTTTAGATGGGCACAAGAATACGGCATT
GGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTGGAAGGAAAGGGCGTGAAAAGGGATTACAAAAAAGCGCAACTCTA
TGCAAAAAACGCTATCAAAGGGTATGGGAGCGGGTTGTTGGGGGGCGCTCTTATTTTAGGACGCATGCAAGCAGAAGGCT
TAGGGATGAAAAAGGATTTGAAACAAGCGCTCAATACTTACAGGCAAGCGCTTCGCGTATTTTCTAATAAAGGCATAAAT
TTTCATAACAATTTTAGATTACCAGATCTTACGGAAATGACTGGCATGCTTATTGGAGCGCGTTTCATTGATCTTTCAAG
TTTGAACGCGAATCCTATAAAATTTGAAAAGCAATTTGCAAACATGGTGGAGTTTGTCTTTGGCATTAAGAATGAACCAA
TAGTTCCTTATGATGCTGCTGAAATTTCAAGCAATATTATTTTACTCAAGCAACAAATAGGGGAAATCCTTTATAGAATT
GGGATCGCTTATCAAGAAGGGCTTGGCACCAAAAAGAAAAAAGAGAAGGCTAAAAAATTCTTGCAAAAATCCGCAGAATT
TGGCTATGAAAAAGCTATGGAAGCTCTGTAG

Upstream 100 bases:

>100_bases
TTGATAAATGAAGCGTTTAAGATAGATCGATTGAGATTGCTCTTTTGTTTGACATTTTTGAATTTAGCTCTTTTGGTCAT
GTTATTTAAAAGGATCTGAC

Downstream 100 bases:

>100_bases
TTTTTTAATCAAGCTTGTAACCAAGCTTTAAGATTAGAAAAATCCGCTTAAATCGCTCTCATTAAAACAAAGCCCTATTT
TTCCATTATAATAGACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFKDFYRTTFSFLKPLLLLLCLLLPFSLHADSDDCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGI
GLGSVYLAKMYLEGKGVKRDYKKAQLYAKNAIKGYGSGLLGGALILGRMQAEGLGMKKDLKQALNTYRQALRVFSNKGIN
FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNEPIVPYDAAEISSNIILLKQQIGEILYRI
GIAYQEGLGTKKKKEKAKKFLQKSAEFGYEKAMEAL

Sequences:

>Translated_276_residues
MFKDFYRTTFSFLKPLLLLLCLLLPFSLHADSDDCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGI
GLGSVYLAKMYLEGKGVKRDYKKAQLYAKNAIKGYGSGLLGGALILGRMQAEGLGMKKDLKQALNTYRQALRVFSNKGIN
FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNEPIVPYDAAEISSNIILLKQQIGEILYRI
GIAYQEGLGTKKKKEKAKKFLQKSAEFGYEKAMEAL
>Mature_276_residues
MFKDFYRTTFSFLKPLLLLLCLLLPFSLHADSDDCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGI
GLGSVYLAKMYLEGKGVKRDYKKAQLYAKNAIKGYGSGLLGGALILGRMQAEGLGMKKDLKQALNTYRQALRVFSNKGIN
FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNEPIVPYDAAEISSNIILLKQQIGEILYRI
GIAYQEGLGTKKKKEKAKKFLQKSAEFGYEKAMEAL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31526; Mature: 31526

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure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HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA