Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527627

Identifier: 188527627

GI number: 188527627

Start: 825192

End: 825374

Strand: Reverse

Name: 188527627

Synonym: HPSH_04245

Alternate gene names: NA

Gene position: 825374-825192 (Counterclockwise)

Preceding gene: 188527630

Following gene: 188527626

Centisome position: 51.31

GC content: 35.52

Gene sequence:

>183_bases
TTGGTGGCAAAAATATTTGATTTGTTTGTGATTGGTGATTATTTAGCACTTGATTTTGTGAATAATTTTACCAATGGATT
AAAGGATTTTCTTCTTAGTGGTTTGTATACCGCTGTGGAGCGCTTTCTGCTAAACCACGCATTAGAACTCCGAGCAAGCG
AGAACTTGTACAACCAAAAATAA

Upstream 100 bases:

>100_bases
TGTGTTGGCAATTTTGTTTTTGGTATGGTGGTGGTTTTCCAATTAATATTAAGAAAAATTTGCTATAATAGGGGGATAAA
AACAAAAAGAATATGAATGT

Downstream 100 bases:

>100_bases
TAGGAATCCAAAAATAAAAGGACTGATTATGGGAAAAATTTTAGCTTCTTTGTTGGGTGGCGGAACAAATCTTTTTATGG
GTTTATCTAGTGATTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MVAKIFDLFVIGDYLALDFVNNFTNGLKDFLLSGLYTAVERFLLNHALELRASENLYNQK

Sequences:

>Translated_60_residues
MVAKIFDLFVIGDYLALDFVNNFTNGLKDFLLSGLYTAVERFLLNHALELRASENLYNQK
>Mature_60_residues
MVAKIFDLFVIGDYLALDFVNNFTNGLKDFLLSGLYTAVERFLLNHALELRASENLYNQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6900; Mature: 6900

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKIFDLFVIGDYLALDFVNNFTNGLKDFLLSGLYTAVERFLLNHALELRASENLYNQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVAKIFDLFVIGDYLALDFVNNFTNGLKDFLLSGLYTAVERFLLNHALELRASENLYNQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA