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The map label for this gene is cagT [H]

Identifier: 188527630

GI number: 188527630

Start: 826879

End: 827721

Strand: Reverse

Name: cagT [H]

Synonym: HPSH_04260

Alternate gene names: 188527630

Gene position: 827721-826879 (Counterclockwise)

Preceding gene: 188527631

Following gene: 188527627

Centisome position: 51.46

GC content: 36.3

Gene sequence:

>843_bases
ATGAAACTGAGAGCAAGTGTTTTAATCGGTGCGATAATTCTGTGCTTAACTTTAAGCGCGTGCAGTAATTATGCGAAAAA
AGTGGTGAAACAAAAGAACCATGTTTATACGCCTGTGTATAATGAATTGATAGAGAAGTATAGTGAGATACCCTTAAATG
ACAAACTCAAAGACACACCATTCATGGTGCAAGTGAAGTTGCCAAATTACAAGGACTATTTGTTGGATAATAAACAAGTT
GTATTAACTTTCAAACTTGTTCATCATTCTAAAAAGATTACGCTCATAGGCGATGCCAATAAGATACTCCAATACAAGAA
TTACTTCCAAGCTAATGGAGCGAGATCCGATATTGATTTTTACTTGCAGCCTACTTTGAATCAAAAGGGTGTGGTGATGA
TAGCGAGTAACTATAATGATAATCCTAACAACAAAGAACAACCACAGACTTTTGATGTGTTGCAAGGAAGTCAGCCAATG
CTAGGAGCTAACACAAAAAACTTGCATGGCTATGATGTGAGTGGAGCAAACAACAAGCAAGTGATCAATGAAGTGGCAAG
AGAAAAAGCTCAGCTAGAAAAAATCAATCAGTATTACAAAACGCTCTTACAAGACAAGGAACAAGAATACACCACTAGAA
AAAATAACCAACGAGAAATTTTAGAAACATTGAGTAATCGTGCAGGTTACCAAATGAGACAGAATGTGATTAGTTCTGAG
ATTTTTAAGAATGGCAACTTGAACATGCAATCCAAAGAAGAAGAAGTTAGGGAGAAGCTACAAGAAGAAAGAGAGAATGA
ATACTTGCGCAATCAAATCAGAAGTTTGCTCAGTGGTAAGTGA

Upstream 100 bases:

>100_bases
GGGCTATTTGATCTATAAAGTTATTAAGGTTATTGGTATAAAAAATTTTATCAATGGTCTTTTCACTTCAAAGAAACAAG
AATAATAAGGAGAAACAACA

Downstream 100 bases:

>100_bases
TTAGAAGAAAGGGAGAGAGTGCTTTTTTCTAAGGGTAGAGAGCAACGCCAATAGGCGTTAGCCTTACTTGATAGGTAAGG
CGATCAAGTAGGTAATCTTT

Product: cag pathogenicity island protein (cagT, cag12)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKLRASVLIGAIILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQSKEEEVREKLQEERENEYLRNQIRSLLSGK

Sequences:

>Translated_280_residues
MKLRASVLIGAIILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQSKEEEVREKLQEERENEYLRNQIRSLLSGK
>Mature_280_residues
MKLRASVLIGAIILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQSKEEEVREKLQEERENEYLRNQIRSLLSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32417; Mature: 32417

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRASVLIGAIILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
FMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDF
EEEEEECCCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEE
YLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQ
EEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
VINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
IFKNGNLNMQSKEEEVREKLQEERENEYLRNQIRSLLSGK
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLRASVLIGAIILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
FMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDF
EEEEEECCCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEE
YLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQ
EEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
VINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
IFKNGNLNMQSKEEEVREKLQEERENEYLRNQIRSLLSGK
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]