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The map label for this gene is 188527615

Identifier: 188527615

GI number: 188527615

Start: 813803

End: 814735

Strand: Direct

Name: 188527615

Synonym: HPSH_04185

Alternate gene names: NA

Gene position: 813803-814735 (Clockwise)

Preceding gene: 188527613

Following gene: 188527616

Centisome position: 50.59

GC content: 39.98

Gene sequence:

>933_bases
ATGACCCAATACAATCAGAGCATCGCTGAAGCCGTAAGCATGCCTATGAAAGCCGCTAACCAACAATACAACCAATTGTA
TCAAGGTTTTAACGATCAAAGCATGGCTGTGGGGAATAATATCTTAAATATTAGCAAATTAACAGGGGAATTTAATGCGC
AAGGCAACACGCAAGGTGCGCAAATTGGTGCTGTTAATAGTCAGATTGCAAGCATTTTAGCGAGTAACACTACCCCTAAA
AATCCCAGTGCTATTGAAGCTTATGCGACGAATCAAATCGCTGTTCCTAGTGTGCCAACAACGGTTGAAATGATGAGCGG
TATCTTAGGCAATATTACAAGTGCAGCACCAAAATACGCCCTAGCCCTACAAGAGCAACTGCGTTCTCAAGCAAGCAACA
GCTCAATGAATGATACAGCCGATTCCCTTGATAGCTGTACCGCTTTGGGTGCGCTTGCTAGCTCATCAAAAGTGTTTTTT
AGTTGCATGCAAATTTCTATGACTCCTATGAGTGTCTCTATGCCCACTGTTTATGCCAAATACCAAGCGTTAGTCGCTAA
TGCCCTAACTTCAGGCGTTAATCCTATGACCACTCCTGCATGCCCTACTGGGGACAAAGTTCTTGTCGTTTATTGCTATG
CTGAAAAGGTAGCAGAAATTTTGAGAGAATACTATATAGAATTTGTGAAAAACAATACCAATTTGTTGCAAAACGCTTCT
CAAATGATACTTAATCAATCAGGATTAGCTACTAGCACCTATGACACTCAAGCGATTTCTAACATAAGCTCGCTATATAA
CTACAATATAGTAGCGAATAAATCTTTTTTGAAATCGCATCTGACTTATCTTGATTACATCAAAGACAAACTTAAGGGGC
AAAAAGATAGCTACTTAACAGAAAGGGTGCAAACTAAAATAATCGTGAAGTGA

Upstream 100 bases:

>100_bases
TGGTGTTGCAGGGCCATTTGCAGGAATAGTAGCGGGTGCTATGACAGCAGCGATTATTCCTATTGTTGTGGCATTTACTA
ATCCGCAAATGACCGCTATC

Downstream 100 bases:

>100_bases
GGAAAGAGATGTGAAGTATTTTTTAAGCATATTTTCTTTCTTAACTTTTTTGTTTCTGAATGGTGGAGAGGTAGTAATAA
CGCTTGAACCTGCCTTAAAA

Product: cag pathogenicity island protein (cagH, cag20)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQIGAVNSQIASILASNTTPK
NPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFF
SCMQISMTPMSVSMPTVYAKYQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK

Sequences:

>Translated_310_residues
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQIGAVNSQIASILASNTTPK
NPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFF
SCMQISMTPMSVSMPTVYAKYQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK
>Mature_309_residues
TQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQIGAVNSQIASILASNTTPKN
PSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFS
CMQISMTPMSVSMPTVYAKYQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNASQ
MILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33522; Mature: 33391

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHCCCCCCCCCCCCC
QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
EECCHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHH
LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHH
YQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERVQTKIIVK
HHHHHHEECC
>Mature Secondary Structure 
TQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHCCCCCCCCCCCCC
QIGAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYA
EECCHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCHHHH
LALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHH
YQALVANALTSGVNPMTTPACPTGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLT
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERVQTKIIVK
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA