Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527613

Identifier: 188527613

GI number: 188527613

Start: 813190

End: 813621

Strand: Direct

Name: 188527613

Synonym: HPSH_04175

Alternate gene names: NA

Gene position: 813190-813621 (Clockwise)

Preceding gene: 188527612

Following gene: 188527615

Centisome position: 50.55

GC content: 36.11

Gene sequence:

>432_bases
ATGAAAACGAATTTTTATAAAATTAAATTACTATTTGCTTGGTGTCTTATCATTGGTATGTTTAACGCTCCGCTTAACGC
TGACCAAAACACTGATATAAAAGATATTAGTCCTGAAGATATGGCACTAAATAGCGTGGGGCTTGTTTCTAGAGATCAAC
TAAAAATAGAGATCCCTAAAGAAACCCTAGAGCAAAAAGTGGCCATACTCAATGACTATAATGATAAGAATGTTAATATC
AAGTTTGATGACATAAGTTTAGGGAGTTTTCAACCTAATGATAATCTAGGTATCAATGCGATGTGGGGCATTCAAAATCT
TCTCATGAGCCAAATGATGGGCGATTACGGCCCAAACAATCCTTTCATGTATGGTTATGCACCAACATATCCAGATTCAT
CGTTTTTACCACCAGGCTTAGGGGGGTATTAA

Upstream 100 bases:

>100_bases
AAACAAAATGCTCGATCAAAAAAATCAAAACAAAAATAGCGATTGAGTGGTATTAAAGCGCTAGAATAGTGCTAAAAATA
AGAATAAAGGAGTCAAAAGT

Downstream 100 bases:

>100_bases
CATGGCAGGCACACAAGCTATATATGAATCATCTTCTGCAGGCTTCTTATCGCAAGTCTCATCAGTCATCTCAAGCACAA
GTGGTGTTGCAGGGCCATTT

Product: cag pathogenicity island protein (cagG, cag21)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI
KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYPDSSFLPPGLGGY

Sequences:

>Translated_143_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI
KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYPDSSFLPPGLGGY
>Mature_143_residues
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI
KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYPDSSFLPPGLGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16053; Mature: 16053

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH
ETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN
HHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PFMYGYAPTYPDSSFLPPGLGGY
CEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCH
ETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNN
HHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PFMYGYAPTYPDSSFLPPGLGGY
CEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA