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The map label for this gene is ykgB [C]

Identifier: 188527588

GI number: 188527588

Start: 790596

End: 791243

Strand: Direct

Name: ykgB [C]

Synonym: HPSH_04050

Alternate gene names: 188527588

Gene position: 790596-791243 (Clockwise)

Preceding gene: 188527587

Following gene: 188527590

Centisome position: 49.15

GC content: 41.05

Gene sequence:

>648_bases
ATGCAAGCGTTAAAATCATTACTTGAAATGATTACAAAACTCCAGAATCTAGGCGGCTATTTGATGCATATAGCTATTTT
TATCATTTTTATTTGGATTGGAGGGCTTAAGTTTGTGCCGTATGAAGCCGAAGGGATCGCTCCTTTTGTGGCCAACTCCC
CTTTCTTTTCTTTCATGTATAAATTTGAAAAACCCGCATACAAACAGCACAAAATGTCTGAATCCCAATCCATGCAAGAA
GAAATGCAAGATGACCCTAAAATCGTTGAAAATAAAGAATGGCATAAAGAAAACCGCACTTATTTAGTGGCTGAAGCTTT
AGGGATCACGATTATGATCCTAGGTATTTTGGTGCTTTTAGGGCTTTGGATGCCTTTAATGGGCGTGATTGGGGGCTTGC
TTGTCTCTGGAATGACGATCACGACCCTATCTTTTTTATTCACAACGCCAGAAGTGTTTGTCAATCAGCATTTCCCATGG
CTTTCTGGGGCTGGAAGGTTAGTGGTTAAAGACTTGGCGTTATTTGCTGGAGGCTTGTTTGTGGCCGGGTTTGATGCGAA
ACGCTATTTAGAGGGGAAAGGGTTTTGCTTGATGAATCGCTCATCAGTAGGGATTAAAACTAAATGCTCTAGTGGGTGTT
GCTCTTAA

Upstream 100 bases:

>100_bases
TTTCTTGTAATAGTAATGATTTTGTTGCAATTAAACATAATGCGCTATCATTTGCGAGTTGTTTTTAGCAATATAAAAAA
TATCCTAAAGGAATAAAACC

Downstream 100 bases:

>100_bases
GGAGCGAACGCCTTAAAGTAGGCTTAAAGCCTACTAGAAGAATCATAATTAGAAGAATCTTGGTTAGTGCCTTTTTTGTA
AATGATTGTTTTTAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQALKSLLEMITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVSGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMNRSSVGIKTKCSSGCCS

Sequences:

>Translated_215_residues
MQALKSLLEMITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVSGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMNRSSVGIKTKCSSGCCS
>Mature_215_residues
MQALKSLLEMITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVSGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMNRSSVGIKTKCSSGCCS

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0219 [H]

Homologues:

Organism=Escherichia coli, GI87081715, Length=211, Percent_Identity=36.9668246445498, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 23970; Mature: 23970

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALKSLLEMITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHH
KFEKPAYKQHKMSESQSMQEEMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVSGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDAKRYLEGKGFCLMNRSSVGIKTKCSSGCCS
EECCCHHHHHCCCCEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MQALKSLLEMITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHH
KFEKPAYKQHKMSESQSMQEEMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVSGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDAKRYLEGKGFCLMNRSSVGIKTKCSSGCCS
EECCCHHHHHCCCCEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8219279 [H]