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The map label for this gene is dcrA [H]

Identifier: 188527552

GI number: 188527552

Start: 756414

End: 757715

Strand: Direct

Name: dcrA [H]

Synonym: HPSH_03870

Alternate gene names: 188527552

Gene position: 756414-757715 (Clockwise)

Preceding gene: 188527551

Following gene: 188527553

Centisome position: 47.02

GC content: 39.78

Gene sequence:

>1302_bases
ATGTTTGGGAATAAGCAGTTGCAACTTCAAATCCATCAAAAAGATTCTGAAATTACGGCATTAAAAAGGGAAGTCAATCT
CTACAAAAGCCTTTTAGAACTATGCTTGCATGAGGGTTTTATAGGCATCAAGGATAATAAAATCGTTTTTAAAAGCGGGA
GTCTTGCAAGCTTAAACAATTTAGAAGAACAAAGCGTTCATTTTAAAGAAAATGCAGAGAGCGTTAATCTACAAGGGGTT
TCTTATTCTTTAAAAAGCCAAAATATTGATGGCGTGCAGTATTTTTCACTAGCCAAAAAAATAGGAGGTGTGGGGGAATA
CCATAAAAGCGATTTGTTTAAGACTTTTTGCGCGAGCTTAAAAGAAGGCTTAGAGAACGCGCAAGAAAGCATGCAGTATT
TCCATCAAGAAACCGGTGCTCTTTTAAATGCGGCTAATCATGGCGAAGAGCATTCCGCCGAAGGCTTAAAAACCGTCAAT
AAAACGGGTCAAGACATTGAATCGCTTTATGAAAAGATGCAAAACGCCACTTCGTTAGCGGACTCTCTCAACCAACGGAG
CAATGAGATCACTCAAGTCATTTCTTTGATTGATGATATTGCAGAACAAACCAATCTCTTAGCCCTAAATGCCGCTATTG
AGGCCGCACGAGCGGGCGAGCATGGGAGAGGGTTTGCGGTGGTGGCTGATGAGGTGAGAAAACTCGCTGAAAAAACCCAA
AAAGCCACTAAAGAAATCGCCGTCGTGGTTAAAAGCATGCAACAAGAAGCGAACGACATTCAAACCAATACCCACGATAT
TAATTCTATTGTAGGCTCTATTAAGGGCGATGTGGAAGAGCTGAAATCCACCGTGAAAAATAACATGATTGTTGCGCAAG
CGGCAAAATACACCATCTACAATATCAATAACCGGGTGTTTTGCGGTCTGGCCAAACTTGATCATGTAGTCTTTAAAAAC
AATCTTTATGGCATGGTTTTTGGTCTTAACTCCTTTGACATTACCAGCCATAAGAATTGCCGCTTAGGCAAATGGTATTA
TGAGGGCGCGGGCAAAGAGAATTTTTCCAACACTTCAGGCTATAGAGCTTTAGAAAGCCACCATGCGAGCGTGCATGCTG
AAGCTAACGATTTGGTTAAAGCCGTTCAAGAAGATCACATTACCGATTTAAAATTCCTAGAGCATAAAGTGCATTTAATG
GAAGATAGCGCTAAACATGTCAAAGAAAATATTGATAAGATGTTTTACGAAAAACAAGACGAACTCAATAAAATCATTGA
AAAAATTCAAAAAGGCGAATGA

Upstream 100 bases:

>100_bases
CTGAATTGTATTTGAAGCAACAATACTAACGAGCGCTTAAAATGTTTGGTAATTTTGGGTATAATCCCAAAAGATTCAAA
TTTAAATAAGGAATGTCACC

Downstream 100 bases:

>100_bases
TTCCATTCAATGAAGTGTTTTTATGTTTTCTAAATCCTTAGAAGCCCTACACCATGCCAAACGATACCGCAAAAGAGAAT
TGTTTGACCCTTTATTAAAG

Product: methyl-accepting chemotaxis protein (MCP)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MFGNKQLQLQIHQKDSEITALKREVNLYKSLLELCLHEGFIGIKDNKIVFKSGSLASLNNLEEQSVHFKENAESVNLQGV
SYSLKSQNIDGVQYFSLAKKIGGVGEYHKSDLFKTFCASLKEGLENAQESMQYFHQETGALLNAANHGEEHSAEGLKTVN
KTGQDIESLYEKMQNATSLADSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQ
KATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIYNINNRVFCGLAKLDHVVFKN
NLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSGYRALESHHASVHAEANDLVKAVQEDHITDLKFLEHKVHLM
EDSAKHVKENIDKMFYEKQDELNKIIEKIQKGE

Sequences:

>Translated_433_residues
MFGNKQLQLQIHQKDSEITALKREVNLYKSLLELCLHEGFIGIKDNKIVFKSGSLASLNNLEEQSVHFKENAESVNLQGV
SYSLKSQNIDGVQYFSLAKKIGGVGEYHKSDLFKTFCASLKEGLENAQESMQYFHQETGALLNAANHGEEHSAEGLKTVN
KTGQDIESLYEKMQNATSLADSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQ
KATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIYNINNRVFCGLAKLDHVVFKN
NLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSGYRALESHHASVHAEANDLVKAVQEDHITDLKFLEHKVHLM
EDSAKHVKENIDKMFYEKQDELNKIIEKIQKGE
>Mature_433_residues
MFGNKQLQLQIHQKDSEITALKREVNLYKSLLELCLHEGFIGIKDNKIVFKSGSLASLNNLEEQSVHFKENAESVNLQGV
SYSLKSQNIDGVQYFSLAKKIGGVGEYHKSDLFKTFCASLKEGLENAQESMQYFHQETGALLNAANHGEEHSAEGLKTVN
KTGQDIESLYEKMQNATSLADSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQ
KATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIYNINNRVFCGLAKLDHVVFKN
NLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSGYRALESHHASVHAEANDLVKAVQEDHITDLKFLEHKVHLM
EDSAKHVKENIDKMFYEKQDELNKIIEKIQKGE

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=179, Percent_Identity=36.3128491620112, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788194, Length=180, Percent_Identity=37.7777777777778, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI2367378, Length=90, Percent_Identity=47.7777777777778, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789453, Length=180, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787690, Length=102, Percent_Identity=43.1372549019608, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 48412; Mature: 48412

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGNKQLQLQIHQKDSEITALKREVNLYKSLLELCLHEGFIGIKDNKIVFKSGSLASLNN
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCHHHHC
LEEQSVHFKENAESVNLQGVSYSLKSQNIDGVQYFSLAKKIGGVGEYHKSDLFKTFCASL
CHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KEGLENAQESMQYFHQETGALLNAANHGEEHSAEGLKTVNKTGQDIESLYEKMQNATSLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQ
HHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
KATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECEEEEE
NINNRVFCGLAKLDHVVFKNNLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSG
ECCCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
YRALESHHASVHAEANDLVKAVQEDHITDLKFLEHKVHLMEDSAKHVKENIDKMFYEKQD
HHHHHHHCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNKIIEKIQKGE
HHHHHHHHHHCCC
>Mature Secondary Structure
MFGNKQLQLQIHQKDSEITALKREVNLYKSLLELCLHEGFIGIKDNKIVFKSGSLASLNN
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCHHHHC
LEEQSVHFKENAESVNLQGVSYSLKSQNIDGVQYFSLAKKIGGVGEYHKSDLFKTFCASL
CHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KEGLENAQESMQYFHQETGALLNAANHGEEHSAEGLKTVNKTGQDIESLYEKMQNATSLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQ
HHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
KATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECEEEEE
NINNRVFCGLAKLDHVVFKNNLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSG
ECCCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
YRALESHHASVHAEANDLVKAVQEDHITDLKFLEHKVHLMEDSAKHVKENIDKMFYEKQD
HHHHHHHCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNKIIEKIQKGE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]