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The map label for this gene is ycjS [C]

Identifier: 188527476

GI number: 188527476

Start: 664750

End: 665697

Strand: Direct

Name: ycjS [C]

Synonym: HPSH_03470

Alternate gene names: 188527476

Gene position: 664750-665697 (Clockwise)

Preceding gene: 188527475

Following gene: 188527477

Centisome position: 41.33

GC content: 39.98

Gene sequence:

>948_bases
ATGCTTTTTGCTATGATTGGTTCAGGGGGGGTTATCGCTCCCAAGCACTTGCAAGCGATTAGAGATACAGGGCATTTTTT
GGATTGCTCTTTTGATATTCATGATAGCGTGGGGGTTTTAGATGAGTATTTCGCGCAATCAGAGTTTTTTACAAATATTG
AAGATTTTGAAAAGCATTTAGAGCAATCTAAGGCTATGGGTAAAGAAATCAACTATTTGAGTGTTTGCACGCCCACGCAC
ACGCATTTTGATTATATCCGTTTTGGGCTAAAATACGGCATGCATGTGATTTGTGAAAAACCCTTAGTTTTAGACCCTAG
CGAAATACAAGAATTGAAAGATTTAGAGGTGAAATACCAAAAAAGGGTGTTTAGTCTTTTGCCCTTGCGCTTGCATTGCG
ACACGCTGGCCTTAAAAGAAAGAATTAAGAGCGAATTAGACAAAAACCCTAGCAAGGTGTTTGACATCACGCTCACTTAT
ATCAGCGTTCAAGGGAAATGGTATTTTTCTTCATGGCGAGCGGATGTGAATAGGAGCGGGGGGTTAGCCACTCATATGGG
GATAAGCATTTTTGACACTTTATTGTATTTGTTTGGAGGCGTTAAAGACAAGGTTATCAATAGAGAAGAGCTTGATTGCG
TAGGAGGGATACTTTTTTTAGAGCATGCCAAAATAAGGTGGTTTTTTTCCATCAATCCAGAACACATGGGAGTGGCTAAA
GAGAAAGTTTATCGTAAAATGATCCTAGAGGGCGAAGAAGTCAATCTCACGCAGAGTTTTGATAATCTGTATATAGAAAG
CTACAAACAGATTTTAGCTCAAGGGGGGTTTGGCTTGGATGAAGCTATGGCGTCTATCAAACTGGCTTATGAATTAAGAA
ACCTCTCAGTCAGCGAACCCAATGAAGATTCGCATGCTTTGTGTTGCAAAAACAACACATGCAAGTAA

Upstream 100 bases:

>100_bases
GTGTTGGATCGATCGGTGGAGTGTTTTAATTGCCAATAATATAAGCTTAAATAAGCTAATCTTTGCTAAAATGAGATTCA
AAATTATTTAAGGAAGATGA

Downstream 100 bases:

>100_bases
GGCTAATCGCTTTGTAATTTTTTTTAAGAGGGTTTTTTACTTTTTTAAGGGTTTGTATGGATATTTATGCGTTATACATA
GCGATAGGGCTTTTTACTGG

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Oxidoreductase Domain Protein; Oxidoreductase; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein; Oxidoreductase Gfo/Idh/MocA Family; Gfo/Idh/MocA Family Oxidoreductase; Oxidoreductase Family Protein; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccaride Biosynthesis Protein WbpB; Regulatory Protein LacI; Oxidoreductase-Like Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLFAMIGSGGVIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDYIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKERIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATHMGISIFDTLLYLFGGVKDKVINREELDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYRKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASIKLAYELRNLSVSEPNEDSHALCCKNNTCK

Sequences:

>Translated_315_residues
MLFAMIGSGGVIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDYIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKERIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATHMGISIFDTLLYLFGGVKDKVINREELDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYRKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASIKLAYELRNLSVSEPNEDSHALCCKNNTCK
>Mature_315_residues
MLFAMIGSGGVIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDYIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKERIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATHMGISIFDTLLYLFGGVKDKVINREELDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYRKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASIKLAYELRNLSVSEPNEDSHALCCKNNTCK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35988; Mature: 35988

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAMIGSGGVIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL
CEEEEECCCCEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQSKAMGKEINYLSVCTPTHTHFDYIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKYQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKERIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATHMGISIFDTLLYLFGGVKDKVINREELDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHEEEECEEEEEEEECHHHHCHHH
EKVYRKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASIKLAYELRNLSVSEP
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
NEDSHALCCKNNTCK
CCCCCEEEECCCCCC
>Mature Secondary Structure
MLFAMIGSGGVIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFAQSEFFTNIEDFEKHL
CEEEEECCCCEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQSKAMGKEINYLSVCTPTHTHFDYIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKYQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKERIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATHMGISIFDTLLYLFGGVKDKVINREELDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHEEEECEEEEEEEECHHHHCHHH
EKVYRKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASIKLAYELRNLSVSEP
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
NEDSHALCCKNNTCK
CCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA