Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is feoB [H]

Identifier: 188527468

GI number: 188527468

Start: 654393

End: 656339

Strand: Direct

Name: feoB [H]

Synonym: HPSH_03430

Alternate gene names: 188527468

Gene position: 654393-656339 (Clockwise)

Preceding gene: 188527460

Following gene: 188527469

Centisome position: 40.68

GC content: 39.39

Gene sequence:

>1947_bases
GTGGAGCATTCAAACCAAATGAAAGAAATCATTGTCGCTCTTGTGGGCCAACCTAATGTAGGGAAATCCTCTCTCATCAA
CGCTTTGAGCAACGCCCATTTGAAAGTGGGGAATTTTGCCGGGGTTACCGTGGATAAGATGGAAGTGAGTTTGATCCACA
AAGAGCGTCAAATCACTATCATTGATTTACCTGGCACTTACGCGCTCAATGACTTCACCACTGAAGAAAAGGTTACTAAA
GATTTTTTAGAAAAAGGGCAATACGATCTCATTCTTAATGTGGTGGATTCCACCAATTTAGAGCGTAATTTAGCTTTAAG
CGTGCAGTTATTAGACACGAATAAAAAAATGCTTCTTGCACTCAACATGTGGGATGAGGCTCAAAAAGAAGGCATTAAAA
TCAATACAGAAAAGCTTTCTCAAGAATTAGGGGTTGTGTGCGTGCCTACAAGCGCAAGATCCAAAGAAGATCGCTTGAAT
ACGGAGCTTTTATTAGATGAAATTGTCAGGCTTTATTCTCAAAACACTACAAACAATGAAAGCATAAAAGTCCCGTCTCA
AAGTTTTAAGGAGTCTTTAAAATATAGCCAGAGCGCTCAAAGAATCGCCAAATTAGTGATCAGTGAAAACAAACAAAACG
CGAGCTTTGAACACACTTATAAGATTGATAAGATTTTAATGCACAAGCGTTATGGGATTTTCATTTTTTTAGGGTTTATG
TTTATCATTTTTTCCTTGAGCTTTTTAATAGGAGGCGGAGCGCAAAAAGCGCTTGAAGCAGGGTTTAAATTTTTGAGCGA
TAGCGTTAAAGAAAATGTGGCTAATGAAGATTTAGCGTCTTTGGTGGGCGATGGCATTATTGGGGGAGTGGGAGCGACGG
TTTCATTCTTGCCTTTAATTGTGGTGTTGTATTTTGGGATTTCTTTACTAGAAACGACAGGCTATATGAGTAGGGTAGCG
TTTTTATTAGATGGGATCTTGCATAAATTTGGCTTGCATGGGAAGAGTTTTATCCCTTTAATCACCGGTTTTGGCTGCTC
TGTGCCCGCTTACATGGCGACAAGAACCTTACAAAACTATAACGAACGATTGATCACGCTTTTTGTGATCGGGTTTATGA
GCTGCTCGGCAAGACTCCCTATTTATGTGCTGTTTGTAGGCTCGTTTTTCCCTTCTTCAAGCGCGGGGTTTGTGCTGTTT
TGTATTTATATTTTGGGGGCGGTTGTGGCGTTAGTGATGGCCAAATTACTCAAATTAAGCGTGTTTAAAGGACAGACTGA
ATCCTTTATCATGGAAATGCCCAAATACCGTTTTCCCAGTTGGAGAATGGTCTATTTCAGTATCTATACCAAATCGCTTT
CTTACCTTAAAAAGGCCGGGACTTATATTTTAGTGGGAGCGATTTTAATCTGGTTTATGTCTCAATACCCTAAAAGCGAT
GCGGCTATGAAAACTTATAAACAAGAAAGCTTGTTAGTGGATAAAAACACCACCCTTTCAAGCGAAGCTAAAGAAGAAAA
ATTAAAAGAATTAAAAACCAAATTGGATCAAAAGAATTTAAAAAATAGCATTGTAGGAAGAGGCGGGGCGTATTTGGAAA
AAGTCTTTAGCCCTATGGATTTTGATTGGCGTTTGAGCGTCTCGCTTGTAACCGGATTTATGGCTAAAGAGGTGGTGGTT
TCTACTTTGGGGGTGTTGTTTTCTTTAGGGGATCAAAATGAAAAATCTGACGCTTTTAGAGAGATTTTAAGAAAAGAAGT
CAGCGTGCCTAGCGGGATCGCTTTTATCGTGTTTGTGATGTTTTATATCCCTTGTTTTGCAGCGACCATTACTTTTGGTA
GGGAAGCTGGGGGGATCAAGTTTGTAGCGTATTTATTCATCTTCACAACCGTTGTAGCGTATGCGTTTTCCTTGATAGCT
TTTTATGCAACTCAAATTTTGGTTTAA

Upstream 100 bases:

>100_bases
TTCTTGTTTCGCTTTTATTATATAACAATTAGTCTTATAGCGCTATAGTGCTAACTTTTAATATCAAAACTATGTAACCA
AAAATTAAAAAAACTTTAAT

Downstream 100 bases:

>100_bases
AGGTTAGCCATGGTTTAAAAACCCTTTATTTGTTTAAAATTCACCCTATTAGAAATATTAAAAAATTTTTATTTTTCTCC
CAATCTTTTCTATAAACATT

Product: iron(II) transport protein

Products: Fe (II) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MEHSNQMKEIIVALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVSLIHKERQITIIDLPGTYALNDFTTEEKVTK
DFLEKGQYDLILNVVDSTNLERNLALSVQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLN
TELLLDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENKQNASFEHTYKIDKILMHKRYGIFIFLGFM
FIIFSLSFLIGGGAQKALEAGFKFLSDSVKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVA
FLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLF
CIYILGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSD
AAMKTYKQESLLVDKNTTLSSEAKEEKLKELKTKLDQKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVV
STLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIA
FYATQILV

Sequences:

>Translated_648_residues
MEHSNQMKEIIVALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVSLIHKERQITIIDLPGTYALNDFTTEEKVTK
DFLEKGQYDLILNVVDSTNLERNLALSVQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLN
TELLLDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENKQNASFEHTYKIDKILMHKRYGIFIFLGFM
FIIFSLSFLIGGGAQKALEAGFKFLSDSVKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVA
FLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLF
CIYILGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSD
AAMKTYKQESLLVDKNTTLSSEAKEEKLKELKTKLDQKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVV
STLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIA
FYATQILV
>Mature_648_residues
MEHSNQMKEIIVALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVSLIHKERQITIIDLPGTYALNDFTTEEKVTK
DFLEKGQYDLILNVVDSTNLERNLALSVQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLN
TELLLDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENKQNASFEHTYKIDKILMHKRYGIFIFLGFM
FIIFSLSFLIGGGAQKALEAGFKFLSDSVKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVA
FLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLF
CIYILGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSD
AAMKTYKQESLLVDKNTTLSSEAKEEKLKELKTKLDQKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVV
STLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIA
FYATQILV

Specific function: ATP-driven Fe(2+) uptake system [H]

COG id: COG0370

COG function: function code P; Fe2+ transport system protein B

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1789813, Length=749, Percent_Identity=28.0373831775701, Blast_Score=267, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003373
- InterPro:   IPR011640
- InterPro:   IPR011642
- InterPro:   IPR002917
- InterPro:   IPR005225 [H]

Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 72257; Mature: 72257

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHSNQMKEIIVALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVSLIHKERQITI
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEE
IDLPGTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSVQLLDTNKKMLLA
EECCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEE
LNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNE
EECHHHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
SIKVPSQSFKESLKYSQSAQRIAKLVISENKQNASFEHTYKIDKILMHKRYGIFIFLGFM
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FIIFSLSFLIGGGAQKALEAGFKFLSDSVKENVANEDLASLVGDGIIGGVGATVSFLPLI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHH
VVLYFGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
NERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSD
HHCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
AAMKTYKQESLLVDKNTTLSSEAKEEKLKELKTKLDQKNLKNSIVGRGGAYLEKVFSPMD
HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
FDWRLSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVM
CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
FYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHSNQMKEIIVALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVSLIHKERQITI
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEE
IDLPGTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSVQLLDTNKKMLLA
EECCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEE
LNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNE
EECHHHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
SIKVPSQSFKESLKYSQSAQRIAKLVISENKQNASFEHTYKIDKILMHKRYGIFIFLGFM
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FIIFSLSFLIGGGAQKALEAGFKFLSDSVKENVANEDLASLVGDGIIGGVGATVSFLPLI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHH
VVLYFGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
NERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSD
HHCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
AAMKTYKQESLLVDKNTTLSSEAKEEKLKELKTKLDQKNLKNSIVGRGGAYLEKVFSPMD
HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
FDWRLSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVM
CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
FYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Fe (II) [Periplasm] [C]

Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]