Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527426

Identifier: 188527426

GI number: 188527426

Start: 608386

End: 608691

Strand: Direct

Name: 188527426

Synonym: HPSH_03210

Alternate gene names: NA

Gene position: 608386-608691 (Clockwise)

Preceding gene: 188527425

Following gene: 188527427

Centisome position: 37.82

GC content: 37.25

Gene sequence:

>306_bases
ATGTTTTCTAAAATCTGCTCATCTTTTAAGCTCGCCAATTTGTTCAAGGGCTTTTTGTTCAAACGCATCGCAAGCCCCAT
GCAGAGCACTCGCATAATCAACTTGGCTTTGGATATAAAAAATGTTTTTGAGAAAGAAAACGATCCATCAAACAAGATAG
GCAAGACTTTGGATTTGATCGTGGGTTTTAAGAAGGAGAACCCGCAAGATTTTGACGAATTGTTTGAAATTTTAAAAGAA
CTCATCCAGGAATACGAGAAAAATCCTGACGAGGTCAAGCAGAATCTCACAGAGATTTTGAAATAA

Upstream 100 bases:

>100_bases
GATCCAATCTGTGTTAAAATACCCAACGCACCAACGCCAAAACGCTTGCTAGTTTTTGGCTAGTAAGCGGTGTTTTTCAA
TCTTTTAATAAGGGAAGACA

Downstream 100 bases:

>100_bases
GGCAAGGCATGAACCACCTTTTAATCCTCTACAATCCTTACTACCAGCGAGATGTCATACAACAACATTTAAGCGTTTTG
CAGGAAAAATCCCAAGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MFSKICSSFKLANLFKGFLFKRIASPMQSTRIINLALDIKNVFEKENDPSNKIGKTLDLIVGFKKENPQDFDELFEILKE
LIQEYEKNPDEVKQNLTEILK

Sequences:

>Translated_101_residues
MFSKICSSFKLANLFKGFLFKRIASPMQSTRIINLALDIKNVFEKENDPSNKIGKTLDLIVGFKKENPQDFDELFEILKE
LIQEYEKNPDEVKQNLTEILK
>Mature_101_residues
MFSKICSSFKLANLFKGFLFKRIASPMQSTRIINLALDIKNVFEKENDPSNKIGKTLDLIVGFKKENPQDFDELFEILKE
LIQEYEKNPDEVKQNLTEILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11771; Mature: 11771

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKICSSFKLANLFKGFLFKRIASPMQSTRIINLALDIKNVFEKENDPSNKIGKTLDLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VGFKKENPQDFDELFEILKELIQEYEKNPDEVKQNLTEILK
HCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MFSKICSSFKLANLFKGFLFKRIASPMQSTRIINLALDIKNVFEKENDPSNKIGKTLDLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VGFKKENPQDFDELFEILKELIQEYEKNPDEVKQNLTEILK
HCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA