| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527335
Identifier: 188527335
GI number: 188527335
Start: 524118
End: 524297
Strand: Direct
Name: 188527335
Synonym: HPSH_02710
Alternate gene names: NA
Gene position: 524118-524297 (Clockwise)
Preceding gene: 188527327
Following gene: 188527343
Centisome position: 32.58
GC content: 38.89
Gene sequence:
>180_bases TTGTTCCATAAACTGATCTTAACATGCTTTTTAACGCTTGTAGCAATAACGATTCAAGCTTGCGGCTATAAAGCCCCCCC ATTCAATGAAAAACCCGCTAAAAAAACTTCAAACAGCTCTAATTCTTCTATGCAAACGCCCACCAACAACACCACGCCAG AATTTTTAAATCAGCCTTAA
Upstream 100 bases:
>100_bases CTTGTAAACTTAAAGGCATAAAAACCTTAAGCTTTTTGAGTTTCAAAAGAGTTTCAAGCTTTTTATAAGACTTTTTTTGA ATGAGTAAGGAGAAAATATT
Downstream 100 bases:
>100_bases AATCACGGCTCTTATTTAAGGGCTTTGATTTCTAGGGTTTTTGTGGCCAACTTTTGAGCCTCGCTCTCATCATGCGTTAC CATAATGAAAGTAGCGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MFHKLILTCFLTLVAITIQACGYKAPPFNEKPAKKTSNSSNSSMQTPTNNTTPEFLNQP
Sequences:
>Translated_59_residues MFHKLILTCFLTLVAITIQACGYKAPPFNEKPAKKTSNSSNSSMQTPTNNTTPEFLNQP >Mature_59_residues MFHKLILTCFLTLVAITIQACGYKAPPFNEKPAKKTSNSSNSSMQTPTNNTTPEFLNQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6517; Mature: 6517
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHKLILTCFLTLVAITIQACGYKAPPFNEKPAKKTSNSSNSSMQTPTNNTTPEFLNQP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC >Mature Secondary Structure MFHKLILTCFLTLVAITIQACGYKAPPFNEKPAKKTSNSSNSSMQTPTNNTTPEFLNQP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA