| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is guaC [H]
Identifier: 188527299
GI number: 188527299
Start: 487592
End: 488569
Strand: Reverse
Name: guaC [H]
Synonym: HPSH_02530
Alternate gene names: 188527299
Gene position: 488569-487592 (Counterclockwise)
Preceding gene: 188527302
Following gene: 188527283
Centisome position: 30.37
GC content: 40.39
Gene sequence:
>978_bases TTGAAAATATTTGATTACGAAAACATCCAGCTCATCCCTAATAAATGTATCGTGAATAGCCGTTCAGAGTGTGATACGAC CGTTACCTTAGGTAGGCACACATTTAAAATGCCAATAGTCCCAGCAAACATGCAAACAATCATCAACGACTCGATCGCAG AATTTCTAGCGGAAAATGGCTATTTCTACATCATGCACCGTTTTGATGGAGCGGCAAGAATCCCGTTTGTCAAAAAAATG AAGGAACGCCAATGGATCAGCTCCATCAGTGTTGGGGTGAAAAAGGAAGAATATCTTTTTATAGAAGAGTTGGCCAAACA AAAATTAGCGTCAGATTATATCACGATTGATATTGCGCATGGCCATTCAAATTCTGTCATTGAAATGATCCAACACATCA AAACGCATTTGCCAGAAACTTTTGTGATTGCCGGGAATGTTGGCACACCAGAAGCAGTCCGTGAATTAGAGAACGCCGGT GCTGACGCTACAAAAGTTGGCATTGGACCTGGGAAAGCGTGTATCACCAAAATCAAAACAGGCTTTGGTACGGGTGGTTG GCAACTGGCAGCTCTTAGATGGTGCGCTAAAGCAGCAAGAAAACCGATTATTGCAGATGGTGGTATTCGCACGCATGGCG ATATTGCAAAATCAATACGCTTTGGCGCGACAATGGTAATGATTGGCTCGCTTTTTGCAGGGCATGAAGAATCATCTGGG GAAACAAAAATAGAAAATGGTATCGCATATAAAGAATATTTCGGTTCAGCATCAGAGTTCCAAAAAGGTGAAAAGAAAAA TATTGAAGGTAAGAAAATTTGGATCCAACATAAAGGATCATTAAAAGATACGCTGATTGAAATGCATCAAGATCTACAAT CTTCAATCTCCTATGCAGGTGGGAGAGATCTTGAAGCGATTCGAAAAGTTGATTATGTCATTGTGAAAAATTCAATTTTC AATGGAGACGCAATCTAA
Upstream 100 bases:
>100_bases ATTCAAATTAAGATAGATTACAAAAGGTTCTTAAAAATAATGCTTAAAATCAAATAATGTTCGTGTTTTGCTCTATACGA ACATCAAAAGGATCGTGTCA
Downstream 100 bases:
>100_bases AAAAGATTGATGAAACGAAAGCAAAAGACAGAAAAAATGGTCTCCAACTTGTTTTTCAAGCGGTTTGCTTTGACTTAGAT TTTTGTTGTTTTTAATCCTT
Product: guanosine 5'-monophosphate oxidoreductase
Products: NA
Alternate protein names: Guanosine 5'-monophosphate oxidoreductase; Guanosine monophosphate reductase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKIFDYENIQLIPNKCIVNSRSECDTTVTLGRHTFKMPIVPANMQTIINDSIAEFLAENGYFYIMHRFDGAARIPFVKKM KERQWISSISVGVKKEEYLFIEELAKQKLASDYITIDIAHGHSNSVIEMIQHIKTHLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKACITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDAI
Sequences:
>Translated_325_residues MKIFDYENIQLIPNKCIVNSRSECDTTVTLGRHTFKMPIVPANMQTIINDSIAEFLAENGYFYIMHRFDGAARIPFVKKM KERQWISSISVGVKKEEYLFIEELAKQKLASDYITIDIAHGHSNSVIEMIQHIKTHLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKACITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDAI >Mature_325_residues MKIFDYENIQLIPNKCIVNSRSECDTTVTLGRHTFKMPIVPANMQTIINDSIAEFLAENGYFYIMHRFDGAARIPFVKKM KERQWISSISVGVKKEEYLFIEELAKQKLASDYITIDIAHGHSNSVIEMIQHIKTHLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKACITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDAI
Specific function: Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides [H]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI50541956, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI50541954, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI156104880, Length=338, Percent_Identity=29.8816568047337, Blast_Score=155, Evalue=3e-38, Organism=Homo sapiens, GI217035146, Length=255, Percent_Identity=32.5490196078431, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI217035148, Length=255, Percent_Identity=32.156862745098, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI217035150, Length=255, Percent_Identity=32.5490196078431, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI34328930, Length=255, Percent_Identity=32.5490196078431, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI156616279, Length=255, Percent_Identity=32.5490196078431, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI217035152, Length=255, Percent_Identity=32.5490196078431, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI34328928, Length=255, Percent_Identity=32.5490196078431, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI66933016, Length=255, Percent_Identity=31.7647058823529, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1786293, Length=348, Percent_Identity=30.7471264367816, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1788855, Length=220, Percent_Identity=38.1818181818182, Blast_Score=111, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17560440, Length=334, Percent_Identity=30.2395209580838, Blast_Score=148, Evalue=4e-36, Organism=Caenorhabditis elegans, GI71994385, Length=262, Percent_Identity=30.1526717557252, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994389, Length=188, Percent_Identity=33.5106382978723, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322012, Length=252, Percent_Identity=29.7619047619048, Blast_Score=93, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6323585, Length=253, Percent_Identity=28.8537549407115, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323464, Length=253, Percent_Identity=28.8537549407115, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24641071, Length=263, Percent_Identity=31.1787072243346, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24641073, Length=263, Percent_Identity=31.1787072243346, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI28571163, Length=263, Percent_Identity=31.1787072243346, Blast_Score=111, Evalue=5e-25,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR005994 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: =1.7.1.7 [H]
Molecular weight: Translated: 35973; Mature: 35973
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFDYENIQLIPNKCIVNSRSECDTTVTLGRHTFKMPIVPANMQTIINDSIAEFLAENG CCCCCCCCEEECCCHHCCCCCCCCCCEEEECCEEEECCEECCCHHHHHHHHHHHHHHCCC YFYIMHRFDGAARIPFVKKMKERQWISSISVGVKKEEYLFIEELAKQKLASDYITIDIAH EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC GHSNSVIEMIQHIKTHLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKACITKIKT CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH GFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAG CCHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC GRDLEAIRKVDYVIVKNSIFNGDAI CCCHHHHHHHCEEEEECCCCCCCCC >Mature Secondary Structure MKIFDYENIQLIPNKCIVNSRSECDTTVTLGRHTFKMPIVPANMQTIINDSIAEFLAENG CCCCCCCCEEECCCHHCCCCCCCCCCEEEECCEEEECCEECCCHHHHHHHHHHHHHHCCC YFYIMHRFDGAARIPFVKKMKERQWISSISVGVKKEEYLFIEELAKQKLASDYITIDIAH EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC GHSNSVIEMIQHIKTHLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKACITKIKT CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH GFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAG CCHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC GRDLEAIRKVDYVIVKNSIFNGDAI CCCHHHHHHHCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]