Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is ybjG [C]

Identifier: 188527302

GI number: 188527302

Start: 491371

End: 492048

Strand: Reverse

Name: ybjG [C]

Synonym: HPSH_02545

Alternate gene names: 188527302

Gene position: 492048-491371 (Counterclockwise)

Preceding gene: 188527303

Following gene: 188527299

Centisome position: 30.59

GC content: 42.04

Gene sequence:

>678_bases
ATGGTATTTGACAGAACGATAAGCGTAAGAGAAAAGAAAGTGGCTAAAACGCTTGGGATTGTGGGGGTGGTCTTTTTTAT
ATTGTTTGGCATCGTAATAAGCGGGGTGGCTTTTCAAAAAGAGTGGGTGCAACAATTGGATTTATTTTTTATAGACTTGA
TCCGCAACCCTGCCCCCATTCAAGGGAGCGCGTGGCTTTCTTTCGTGTTTTTAAGCACATGGTTTGCGCAAAGCAAGCTC
ACCACTTCTATAGCCTTACTCATTAGCTTGTGGTTTGGGTTTCAAAAACGCATCGCTTTGGCGTTGTGGTTTTTTCCTAG
CATCTTATTAGGTGAAATCACCTTAAAACTCCTTAAGCATTTGGTGGCGCGCCCACGGCCTGTAACTAATGGCGAACTGG
CTTTTGCGCATAACTTTAGTTTCCCTAGCGGGCATGCTTTAGCTTCAGCGCTTTTTTACGGCTCTTTGGCGTTGTTGTTA
TGCTATTCTAACGCCAACAATCGCATTAAAACTATTGGCGCTATTATTTTATTTTTTTGGATTTTTTTAATGGCGTATGA
TAGGGTTTATTTAGGGGTGCATTACCCTAGCGATGTTTTAGGAGGGTTTTTATTAGGGATTGCTTGGTCGTGCTGCTCTT
TAGCGCTTTATTTGGGGTTTTTGAAACGCCCTTATTAA

Upstream 100 bases:

>100_bases
AATGGGATTGTGGTTATTTTATAGTTTTGTCATAAAACTTATTTTTTAATCAAATAAGCTATAATCGCTTTTTTAAAGGT
CATTTTTAAAAGGGGTTTGA

Downstream 100 bases:

>100_bases
ATCGCTTGTAAAGCGTTTTTTAAAAGAAAGTTATGAGTTAGGGATATAACTCCTCTTTCTTTTTGATCTCATCAAATTCA
TCTTTATAGCGGTGTTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Associated Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Family Protein; Phospholipid Phosphatase; Type 2 Phosphatidic Acid Phosphatase Family Protein; Integral Membrane Protein; Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; Phosphoesterase; Phosphatase PAP2-Like Family; Type 2 Phosphatidic Acid Phosphatase; PA-Phosphatase-Like Phosphoesterase; Membrane-Associated Phosphatase; Acid Phosphatase Family Protein; Transmembrane Acid Phosphatase Protein; PAP2 Superfamily; Phosphatidylglycerophosphatase B; PAP2 Domain-Containing Protein; Phosphatidylglycerophosphatase; Transmembrane Acid Phosphatase; PAP2 Superfamily Protein; PAP2 Superfamily Membrane Protein; Phosphatidylglycerophosphatase B Homolog

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVFDRTISVREKKVAKTLGIVGVVFFILFGIVISGVAFQKEWVQQLDLFFIDLIRNPAPIQGSAWLSFVFLSTWFAQSKL
TTSIALLISLWFGFQKRIALALWFFPSILLGEITLKLLKHLVARPRPVTNGELAFAHNFSFPSGHALASALFYGSLALLL
CYSNANNRIKTIGAIILFFWIFLMAYDRVYLGVHYPSDVLGGFLLGIAWSCCSLALYLGFLKRPY

Sequences:

>Translated_225_residues
MVFDRTISVREKKVAKTLGIVGVVFFILFGIVISGVAFQKEWVQQLDLFFIDLIRNPAPIQGSAWLSFVFLSTWFAQSKL
TTSIALLISLWFGFQKRIALALWFFPSILLGEITLKLLKHLVARPRPVTNGELAFAHNFSFPSGHALASALFYGSLALLL
CYSNANNRIKTIGAIILFFWIFLMAYDRVYLGVHYPSDVLGGFLLGIAWSCCSLALYLGFLKRPY
>Mature_225_residues
MVFDRTISVREKKVAKTLGIVGVVFFILFGIVISGVAFQKEWVQQLDLFFIDLIRNPAPIQGSAWLSFVFLSTWFAQSKL
TTSIALLISLWFGFQKRIALALWFFPSILLGEITLKLLKHLVARPRPVTNGELAFAHNFSFPSGHALASALFYGSLALLL
CYSNANNRIKTIGAIILFFWIFLMAYDRVYLGVHYPSDVLGGFLLGIAWSCCSLALYLGFLKRPY

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25313; Mature: 25313

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFDRTISVREKKVAKTLGIVGVVFFILFGIVISGVAFQKEWVQQLDLFFIDLIRNPAPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QGSAWLSFVFLSTWFAQSKLTTSIALLISLWFGFQKRIALALWFFPSILLGEITLKLLKH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVARPRPVTNGELAFAHNFSFPSGHALASALFYGSLALLLCYSNANNRIKTIGAIILFFW
HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IFLMAYDRVYLGVHYPSDVLGGFLLGIAWSCCSLALYLGFLKRPY
HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVFDRTISVREKKVAKTLGIVGVVFFILFGIVISGVAFQKEWVQQLDLFFIDLIRNPAPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QGSAWLSFVFLSTWFAQSKLTTSIALLISLWFGFQKRIALALWFFPSILLGEITLKLLKH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVARPRPVTNGELAFAHNFSFPSGHALASALFYGSLALLLCYSNANNRIKTIGAIILFFW
HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IFLMAYDRVYLGVHYPSDVLGGFLLGIAWSCCSLALYLGFLKRPY
HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA