| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527235
Identifier: 188527235
GI number: 188527235
Start: 419350
End: 420246
Strand: Reverse
Name: 188527235
Synonym: HPSH_02210
Alternate gene names: NA
Gene position: 420246-419350 (Counterclockwise)
Preceding gene: 188527236
Following gene: 188527234
Centisome position: 26.13
GC content: 38.8
Gene sequence:
>897_bases ATGAAAATCTTAATCATTGAAGACGATTTAGCACTAGCTAGGAGTATTTCGCACAATTTGCATGATTTAGGGCATTTTTG CGAGATCATCTCTAGCATTTCAGAAGAAAATAAAGAGCCTTATGATGTGATTTTGGTTTCTTCTAAAGTTTGCACTCAAG GGCGTTGCGAACACTTTGTGCGTTATAATTCCAAGCAAATCATCATCATGATGGCTTCGCATGTCAATGAAGATGGCGTG AATAAACCCATTCAAGCGGGAGCGAGAGATTATATTCTAAAACCTTTTAAAATGGACGAATTGTTGCGTAAGATCCAATA CCACAAAGCCTACCAAGAAATGACCGCTCGCCTAGGATTTTATGAAAATTACTTAGACTTTATCCATGCGGAATTGCCCT TGCCTAAAGATTTTTCTTACCGGCCGCCCTTTATCATCCACACGCCCTCTCAAGAGCTTGCGAACGCTTATTTATTGCAA TACGCTAAAGAAAGGCAAATGGATTTTTCTTTTTTCTCTCTAAAGGATACCACTTGGAAAGAACTATACAAGAATAAAGA CAAACTAGAACGCCCTTTTTACATCATGCATTTAGAAGAGCTTAAAAAAGATGAGCAATTGAAATTGTTAGAATTGGCCC GTTCATGCCCTATTGTTTTGTCCTATACCCATAAAGAACCCCTAGAATTTCCTAAAATTGTGAGCATTGAATGCGGCGAT AAACCCCTATTTTTGTTTAGCAACCACACGACTTTCCTTTCCATTCAAGAATATGAAAGAGAAGCGATCAGGCATTTTTC TTCTACTTGCACCGATACAGAATTGGCTAACAAGCTTGGCATTAGCCGCAAAAGCCTTTGGGAAAAACGCCGGAAGTATA ACTTACCGCGCAAATAA
Upstream 100 bases:
>100_bases TTCATTGGCAAACAAGAAGGGCTGTTAGTCCAAGCGCATGTGAGCATGCGTTATAAACAAAAACTTTAAATGTGATAAAA TGTGATAAAAGGAAGAATTG
Downstream 100 bases:
>100_bases AAGAAAATCCTTAAGCCCTGTTTTCATTGGGCGTTTGATCATAAAAGGTAAAAATGCCAAAAGCGTTTTTACAATCAAAT ACAATCAAAAGAGCTAAAGC
Product: response regulator
Products: NA
Alternate protein names: Two-Component Response Regulator; Response Regulator Receiver Domain Protein; Response Regulator Receiver Protein; Cation-Efflux System Membrane Protein; Two Component Transcriptional Regulator Fis Family; CheY-Like Receiver Domain-Containing Protein; Response Regulator Receiver; Two-Component Regulator; Integral Membrane Protein; Two Component Response Regulator; Two-Component Regulator/Response Regulator
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKILIIEDDLALARSISHNLHDLGHFCEIISSISEENKEPYDVILVSSKVCTQGRCEHFVRYNSKQIIIMMASHVNEDGV NKPIQAGARDYILKPFKMDELLRKIQYHKAYQEMTARLGFYENYLDFIHAELPLPKDFSYRPPFIIHTPSQELANAYLLQ YAKERQMDFSFFSLKDTTWKELYKNKDKLERPFYIMHLEELKKDEQLKLLELARSCPIVLSYTHKEPLEFPKIVSIECGD KPLFLFSNHTTFLSIQEYEREAIRHFSSTCTDTELANKLGISRKSLWEKRRKYNLPRK
Sequences:
>Translated_298_residues MKILIIEDDLALARSISHNLHDLGHFCEIISSISEENKEPYDVILVSSKVCTQGRCEHFVRYNSKQIIIMMASHVNEDGV NKPIQAGARDYILKPFKMDELLRKIQYHKAYQEMTARLGFYENYLDFIHAELPLPKDFSYRPPFIIHTPSQELANAYLLQ YAKERQMDFSFFSLKDTTWKELYKNKDKLERPFYIMHLEELKKDEQLKLLELARSCPIVLSYTHKEPLEFPKIVSIECGD KPLFLFSNHTTFLSIQEYEREAIRHFSSTCTDTELANKLGISRKSLWEKRRKYNLPRK >Mature_298_residues MKILIIEDDLALARSISHNLHDLGHFCEIISSISEENKEPYDVILVSSKVCTQGRCEHFVRYNSKQIIIMMASHVNEDGV NKPIQAGARDYILKPFKMDELLRKIQYHKAYQEMTARLGFYENYLDFIHAELPLPKDFSYRPPFIIHTPSQELANAYLLQ YAKERQMDFSFFSLKDTTWKELYKNKDKLERPFYIMHLEELKKDEQLKLLELARSCPIVLSYTHKEPLEFPKIVSIECGD KPLFLFSNHTTFLSIQEYEREAIRHFSSTCTDTELANKLGISRKSLWEKRRKYNLPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35223; Mature: 35223
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIIEDDLALARSISHNLHDLGHFCEIISSISEENKEPYDVILVSSKVCTQGRCEHFV CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHHHH RYNSKQIIIMMASHVNEDGVNKPIQAGARDYILKPFKMDELLRKIQYHKAYQEMTARLGF HCCCCEEEEEEECCCCCCCCCCCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YENYLDFIHAELPLPKDFSYRPPFIIHTPSQELANAYLLQYAKERQMDFSFFSLKDTTWK HHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHH ELYKNKDKLERPFYIMHLEELKKDEQLKLLELARSCPIVLSYTHKEPLEFPKIVSIECGD HHHCCHHHHCCCEEEEEHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCC KPLFLFSNHTTFLSIQEYEREAIRHFSSTCTDTELANKLGISRKSLWEKRRKYNLPRK CEEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKILIIEDDLALARSISHNLHDLGHFCEIISSISEENKEPYDVILVSSKVCTQGRCEHFV CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHHHH RYNSKQIIIMMASHVNEDGVNKPIQAGARDYILKPFKMDELLRKIQYHKAYQEMTARLGF HCCCCEEEEEEECCCCCCCCCCCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YENYLDFIHAELPLPKDFSYRPPFIIHTPSQELANAYLLQYAKERQMDFSFFSLKDTTWK HHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHH ELYKNKDKLERPFYIMHLEELKKDEQLKLLELARSCPIVLSYTHKEPLEFPKIVSIECGD HHHCCHHHHCCCEEEEEHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCC KPLFLFSNHTTFLSIQEYEREAIRHFSSTCTDTELANKLGISRKSLWEKRRKYNLPRK CEEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA