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The map label for this gene is 188527234

Identifier: 188527234

GI number: 188527234

Start: 418248

End: 419024

Strand: Reverse

Name: 188527234

Synonym: HPSH_02205

Alternate gene names: NA

Gene position: 419024-418248 (Counterclockwise)

Preceding gene: 188527235

Following gene: 188527232

Centisome position: 26.05

GC content: 37.71

Gene sequence:

>777_bases
TTGCTCTCTAATAAAACGCTCCCTAAAAGATTCGCCGCTTGTAGCTTGCAAGAAGTGGGCATAATCTTTCTTACCACTCA
AATTTTATCCATCATGCGCAAAACCCGTTGCTCTAAAACGCTTTTTTTTATCACTAGGGGCAGAGAGAGTTTCCGCTACC
AGCTGTGCGATCATTACAAACAAAAACGCCACCAATTTGATGAAGATTTTAGATCTCTTTTAAAAGCTCTAAAGATCGCT
TTAGTGGAAAAATACCCCCTAAAAAAAGGGGCTAGAATCCAGGGCGAACATTGTTTTGAATATGAAGCCGATGATATTAT
CTCTTTTTACAAAAAGAAAGACCCAAAAAATTATGTGATAGCCAGCATGGATAAGGATATTTTGTATTCCAATAGAGGCT
CTCATTTCAACCTCAAAACCAACGCTTTTTTTAATGTGAGTCGAAAAGAGGCTCATTTTTTTGCTTATTATCAGTGCGTT
GTGGGGGATAAGGGGGATAACATTAAAGGGGTTAAAGGGATTGGCGGCTTCAACTATAAAGATTTTTTAAACGAAGACGC
TAAAAAGCATGAATTGTGGGAGCAGATTATTCAAGCGTTCAAAATCAAAGAAGATTTGAGCGATAGCGAAGCTAAAGAAA
AGGCTCTTTTAAACATGCGTTTGGTCAATATGCACCAGATGACCCACCATGGCGTGATCAAACTATGGGAGCCTGAGTTT
AAAAAAACTTTTTTCCCTAAAAAACCCCAAAGACCTGATTTTAAAAGAATTTCTTAA

Upstream 100 bases:

>100_bases
AGGATTAACCATTAGACAAGCGTTTAACAAGGCAAGGTTTGCACATTCAAAAACCCTTTTACTAGACATTGATTGTGTTA
TCCCTAATATTGTTAGGCGT

Downstream 100 bases:

>100_bases
AACATTTTTATTTTTGATTTTTTAAAACAAAAACTTCCCAAAAAAGACAAAAGAACTATTCCCAAGACTTTTTCTCGTGG
CTTTAGAATTGTAAGCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLSNKTLPKRFAACSLQEVGIIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYKQKRHQFDEDFRSLLKALKIA
LVEKYPLKKGARIQGEHCFEYEADDIISFYKKKDPKNYVIASMDKDILYSNRGSHFNLKTNAFFNVSRKEAHFFAYYQCV
VGDKGDNIKGVKGIGGFNYKDFLNEDAKKHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHHGVIKLWEPEF
KKTFFPKKPQRPDFKRIS

Sequences:

>Translated_258_residues
MLSNKTLPKRFAACSLQEVGIIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYKQKRHQFDEDFRSLLKALKIA
LVEKYPLKKGARIQGEHCFEYEADDIISFYKKKDPKNYVIASMDKDILYSNRGSHFNLKTNAFFNVSRKEAHFFAYYQCV
VGDKGDNIKGVKGIGGFNYKDFLNEDAKKHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHHGVIKLWEPEF
KKTFFPKKPQRPDFKRIS
>Mature_258_residues
MLSNKTLPKRFAACSLQEVGIIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYKQKRHQFDEDFRSLLKALKIA
LVEKYPLKKGARIQGEHCFEYEADDIISFYKKKDPKNYVIASMDKDILYSNRGSHFNLKTNAFFNVSRKEAHFFAYYQCV
VGDKGDNIKGVKGIGGFNYKDFLNEDAKKHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHHGVIKLWEPEF
KKTFFPKKPQRPDFKRIS

Specific function: Unknown

COG id: COG0258

COG function: function code L; 5'-3' exonuclease (including N-terminal domain of PolI)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30446; Mature: 30446

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNKTLPKRFAACSLQEVGIIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYK
CCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
QKRHQFDEDFRSLLKALKIALVEKYPLKKGARIQGEHCFEYEADDIISFYKKKDPKNYVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
ASMDKDILYSNRGSHFNLKTNAFFNVSRKEAHFFAYYQCVVGDKGDNIKGVKGIGGFNYK
EECCCHHHCCCCCCEEEEECCEEEECCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHH
DFLNEDAKKHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHHGVIKLWEPEF
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHH
KKTFFPKKPQRPDFKRIS
HHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSNKTLPKRFAACSLQEVGIIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYK
CCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
QKRHQFDEDFRSLLKALKIALVEKYPLKKGARIQGEHCFEYEADDIISFYKKKDPKNYVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
ASMDKDILYSNRGSHFNLKTNAFFNVSRKEAHFFAYYQCVVGDKGDNIKGVKGIGGFNYK
EECCCHHHCCCCCCEEEEECCEEEECCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHH
DFLNEDAKKHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHHGVIKLWEPEF
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHH
KKTFFPKKPQRPDFKRIS
HHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA