| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is ftsK [H]
Identifier: 188527165
GI number: 188527165
Start: 353083
End: 355722
Strand: Reverse
Name: ftsK [H]
Synonym: HPSH_01860
Alternate gene names: 188527165
Gene position: 355722-353083 (Counterclockwise)
Preceding gene: 188527166
Following gene: 188527164
Centisome position: 22.11
GC content: 39.77
Gene sequence:
>2640_bases ATGAAATCTAAAAAACTTTATTTAGCTTTAATCATAGGGGTTTTATTAGCGTTTTTAACCCTATCTTCATGGCTAGGTAA TAGCGGTTTAGTGGGGCGTTTTGGGGTGTGGTTTGCCGCAATCAATAAAAAATATTTTGGGTATCTTTCATTGGTTAATT TACCCTATTTAGCGTGGGCTTTATTCCTTTTATACAAGACTAAAAACCCTTTTACAGAAATCGTTTTAGAAAAAACTTTA GGGCATTTGCTTGGCATTTTATCTTTGCTCTTTTTGCAATCTAGCCTGTTGGATCAAGGGGAAATCGGCAACAGCGTGCG TTTGTTTTTGCACCCTTTTATAGGGGACTTTGGGCTTTATGCGCTTGTAATGCTTATGGTAGTTATTTCTTATTTGATTT TATTCAAACTGCCCCCTAAAAGCGTTTTTTATCCTTATATAAACAAAACACAAAGCCTTTTAAAAGAGGTTTATAAACAA TGCTTACAAGCCTTTAGCCCTAATTTTAGCCCCAAAAAAGAGGGTTTTGAAAACGCCCCATCAGACATTCAAAAAAAAGA AACCAAAAACGACAAAGAAAAAGAAAACCTCAAAGAAAACCCTATTGATGAAAACCACAAAGCCTCTAACGAAGAATCGT TTCTAGCGATCCCTACCCCCTATAACACGACTTTAAACGCTCTAAAGCCGCAAGAAGGCTTAGTCCAAATCTCCTCCAAC CCTCCTACCCATTACACCATTTACCCTAAAAAAAACCGATTTGATGACTTATCCAACCCCACTAACCCCACTTTAAAAGA GATCAAACAAGAAACTAAAGAAAGAGAACCCACGCCCACCACGCCTACCACACTCAAATCTGTCATGCCCGCATCTGCAC CCAACACAGAAAATGATAACAAAACAGAAAACCACAAAGCCCCAAACCACCCCACAAAAGAAGAAAGCCCACAAGAAAAC GCGCAAGAAGAAATGATAGAAGAAAATATAAAAGAAATGATAGAAGAAAATATAAAAGAAATGATAGAAGAAAATATAAA AGAAATGATAGAAGAAAATATAAAAGAAATGATAGAAGAAAGAATAAAAGAAAATATAAAAGAAGAAGAAAAAGAGACGC AAAACGCTCCAAGTTTTAGCCCAATAACCCCCACAAGCGCTAAAAAACCCGTTATGGTTAAAGAATTGAGCGAAAATAAA GAGATACTAGACGGATTGGATTATGGCGAAGTGCAAAAACCCAAAGATTATGAGCTTCCCACAACGCAATTATTGAATGC GGTTTGTTTGAAGGACACTTCTTTAGATGAAAACGAGATTGACCAAAAAATCCAGGATTTATTGAGCAAGTTGCGCACCT TTAAAATTGATGGCGATATTATCCGCACTTATTCAGGCCCTATTGTAACCACTTTTGAATTCCGCCCAGCCCCTAATGTT AAGGTGAGCCGTATTTTAGGCTTGAGCGATGATTTAGCGATGACTTTATGCGCTGAATCCATTCGCATTCAAGCCCCTAT TAAGGGTAAAGATGTCGTTGGCATTGAAATCCCTAACAGCCAAAGCCAAACCATTTATTTAAGAGAAATTTTAGAGAGCG AATTGTTTCAAAAATCCAGCTCGCCCTTAACTCTAGCTTTAGGCAAAGACATTGTGGGTAACCCTTTCATCACGGATTTA AAAAAGCTCCCCCACTTGCTCATCGCTGGCACGACAGGAAGCGGTAAGAGCGTGGGCGTGAATGCGATGATTTTATCCTT ACTTTATAAAAACCCCCCCGATCAACTCAAATTAGTGATGATCGATCCCAAAATGGTAGAATTTAGCATTTATGCAGACA TTCCTCATTTACTCACGCCCATTATCACCGACCCTAAAAAAGCTATCGGGGCTTTACAAAGCGTGGCTAAAGAAATGGAG CGCCGATATTCTTTAATGAGCGAATACAAGGTTAAAACCATTGATTCTTACAACGAACAGGCCTCAAATAACGGCGTTGA AGCGTTCCCCTATTTGATTGTAGTGATTGATGAATTAGCGGATTTGATGATGACAGGGGGCAAAGAAGCGGAGTTTCCTA TCGCTAGAATCGCTCAAATGGGGCGAGCGAGCGGCTTGCACCTCATTGTAGCGACCCAACGCCCAAGCGTGGATGTCGTA ACCGGCTTGATTAAAACCAACTTGCCTTCAAGGGTGAGTTTTAGGGTAGGCACTAAGATTGATTCTAAAGTGATTTTAGA CACCGATGGGGCGCAAAGCTTGTTAGGAAGGGGCGATATGCTCTTTACCCCCCCAGGATCAAACGGGTTAGTGCGCTTGC ATGCCCCCTTTGCCACTGAAGATGAAATCAAAAAAATCGTGGATTTTATTAAAGCCCAAAAAGCGGTAGAATACGATAAA GATTTCTTGTTAGAAGAATCGCGCATGCCTTTAGACACCCCTAATTATCAAGGCGATGACATTTTAGAAAGGGCTAAAGC GGTGATTTTAGAAAAAAAGATCACTTCTACGAGTTTTTTACAACGCCAATTAAAAATCGGCTACAACCAAGCCGCTACCA TTACTGACGAATTAGAAGCTCAAGGCTTTTTATCCCCAAGAAACGCCAAAGGCAACAGAGAGATTTTGCAAAACTTTTAG
Upstream 100 bases:
>100_bases AATCTTCTCTTATCCCCAAGCTCAAACAAGAAATTGATTTTGAAAAAACTCTAGAGGTTAAAGATTGTGAATATTGCTCT TTTAAAGACATGTGCAACCG
Downstream 100 bases:
>100_bases GCTTTGTTTTCATTGGATATTAGCAAACATTATTTTTAATTTTTAAAAAACTTTTCTCGATGATACAAATGATACCAACC TTTCATCTATTAATCAAATA
Product: cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLVNLPYLAWALFLLYKTKNPFTEIVLEKTL GHLLGILSLLFLQSSLLDQGEIGNSVRLFLHPFIGDFGLYALVMLMVVISYLILFKLPPKSVFYPYINKTQSLLKEVYKQ CLQAFSPNFSPKKEGFENAPSDIQKKETKNDKEKENLKENPIDENHKASNEESFLAIPTPYNTTLNALKPQEGLVQISSN PPTHYTIYPKKNRFDDLSNPTNPTLKEIKQETKEREPTPTTPTTLKSVMPASAPNTENDNKTENHKAPNHPTKEESPQEN AQEEMIEENIKEMIEENIKEMIEENIKEMIEENIKEMIEERIKENIKEEEKETQNAPSFSPITPTSAKKPVMVKELSENK EILDGLDYGEVQKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNV KVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQTIYLREILESELFQKSSSPLTLALGKDIVGNPFITDL KKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEME RRYSLMSEYKVKTIDSYNEQASNNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVV TGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGSNGLVRLHAPFATEDEIKKIVDFIKAQKAVEYDK DFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF
Sequences:
>Translated_879_residues MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLVNLPYLAWALFLLYKTKNPFTEIVLEKTL GHLLGILSLLFLQSSLLDQGEIGNSVRLFLHPFIGDFGLYALVMLMVVISYLILFKLPPKSVFYPYINKTQSLLKEVYKQ CLQAFSPNFSPKKEGFENAPSDIQKKETKNDKEKENLKENPIDENHKASNEESFLAIPTPYNTTLNALKPQEGLVQISSN PPTHYTIYPKKNRFDDLSNPTNPTLKEIKQETKEREPTPTTPTTLKSVMPASAPNTENDNKTENHKAPNHPTKEESPQEN AQEEMIEENIKEMIEENIKEMIEENIKEMIEENIKEMIEERIKENIKEEEKETQNAPSFSPITPTSAKKPVMVKELSENK EILDGLDYGEVQKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNV KVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQTIYLREILESELFQKSSSPLTLALGKDIVGNPFITDL KKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEME RRYSLMSEYKVKTIDSYNEQASNNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVV TGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGSNGLVRLHAPFATEDEIKKIVDFIKAQKAVEYDK DFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF >Mature_879_residues MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLVNLPYLAWALFLLYKTKNPFTEIVLEKTL GHLLGILSLLFLQSSLLDQGEIGNSVRLFLHPFIGDFGLYALVMLMVVISYLILFKLPPKSVFYPYINKTQSLLKEVYKQ CLQAFSPNFSPKKEGFENAPSDIQKKETKNDKEKENLKENPIDENHKASNEESFLAIPTPYNTTLNALKPQEGLVQISSN PPTHYTIYPKKNRFDDLSNPTNPTLKEIKQETKEREPTPTTPTTLKSVMPASAPNTENDNKTENHKAPNHPTKEESPQEN AQEEMIEENIKEMIEENIKEMIEENIKEMIEENIKEMIEERIKENIKEEEKETQNAPSFSPITPTSAKKPVMVKELSENK EILDGLDYGEVQKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNV KVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQTIYLREILESELFQKSSSPLTLALGKDIVGNPFITDL KKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEME RRYSLMSEYKVKTIDSYNEQASNNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVV TGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGSNGLVRLHAPFATEDEIKKIVDFIKAQKAVEYDK DFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=485, Percent_Identity=45.1546391752577, Blast_Score=422, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 98625; Mature: 98625
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLVNLPYLAWA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLLYKTKNPFTEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSVRLFLHPFIGDFGLY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH ALVMLMVVISYLILFKLPPKSVFYPYINKTQSLLKEVYKQCLQAFSPNFSPKKEGFENAP HHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SDIQKKETKNDKEKENLKENPIDENHKASNEESFLAIPTPYNTTLNALKPQEGLVQISSN HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCEEEECCC PPTHYTIYPKKNRFDDLSNPTNPTLKEIKQETKEREPTPTTPTTLKSVMPASAPNTENDN CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC KTENHKAPNHPTKEESPQENAQEEMIEENIKEMIEENIKEMIEENIKEMIEENIKEMIEE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKENIKEEEKETQNAPSFSPITPTSAKKPVMVKELSENKEILDGLDYGEVQKPKDYELP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCC TTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCC KVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQTIYLREILESELFQKSS CHHHHCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC SPLTLALGKDIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVM CCEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEE IDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQ ECCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVV HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHH TGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGSNGLVRLHAPFATE HHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHCCCCEEEECCCCCCEEEEECCCCCH DEIKKIVDFIKAQKAVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFL HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAAINKKYFGYLSLVNLPYLAWA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLLYKTKNPFTEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSVRLFLHPFIGDFGLY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH ALVMLMVVISYLILFKLPPKSVFYPYINKTQSLLKEVYKQCLQAFSPNFSPKKEGFENAP HHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SDIQKKETKNDKEKENLKENPIDENHKASNEESFLAIPTPYNTTLNALKPQEGLVQISSN HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCEEEECCC PPTHYTIYPKKNRFDDLSNPTNPTLKEIKQETKEREPTPTTPTTLKSVMPASAPNTENDN CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC KTENHKAPNHPTKEESPQENAQEEMIEENIKEMIEENIKEMIEENIKEMIEENIKEMIEE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKENIKEEEKETQNAPSFSPITPTSAKKPVMVKELSENKEILDGLDYGEVQKPKDYELP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCC TTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCC KVSRILGLSDDLAMTLCAESIRIQAPIKGKDVVGIEIPNSQSQTIYLREILESELFQKSS CHHHHCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC SPLTLALGKDIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVM CCEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEE IDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQ ECCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVV HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHH TGLIKTNLPSRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGSNGLVRLHAPFATE HHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHCCCCEEEECCCCCCEEEEECCCCCH DEIKKIVDFIKAQKAVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFL HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]