| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is flgG [H]
Identifier: 188527163
GI number: 188527163
Start: 350770
End: 351579
Strand: Reverse
Name: flgG [H]
Synonym: HPSH_01850
Alternate gene names: 188527163
Gene position: 351579-350770 (Counterclockwise)
Preceding gene: 188527164
Following gene: 188527154
Centisome position: 21.86
GC content: 42.84
Gene sequence:
>810_bases ATGCAAAATGGGTATTATGCGGCCACGGGAGCTATGGCGGCGCAATTTAACCGCTTGGATTTAACCTCTAATAATTTAGC TAATTTAAACACCAATGGCTTTAAAAGAGACGATGCGGTTACAGGCGATTTTTTAAGGCTTTACCAACAATACCGAGAGC AACTGCCCTTAGAAGATCAAACCAAAGCGAGCGCGAAGTATTTAAACCGCAATCTCAATCGTGTGCCTATTCTATCAGAA ATCTATACGGATAGGAGTCTTGGCGCGTTTGAAGAAACGCATAACCCCCTAGATTTTGCCCTAACAAGCCCTAACCTCTA TTTTGCGATACAAACTAATGAGGGCGTCGCCTATACCAGAGATGGGCATTTTAGCGTGGATAAAGACGGCTTTTTGGTAA CTCTTAATGGCTTTAGGGTGCTTTCTCGTTCGGGCTTGAACGAAAAAGGAGGGATCATGCTCATGCCTAACGCTGAAATT GAAGTCAATCAAAATGGCGAAATCACTTTTAGGGATAATGAAGCCCCCATTCAAGCAGGCGCGTTAGCTTTAGTGAGTTT TAGCGAACCTAAAAATCTTAAAAAAATAGGGCAAAACCTTTATACTTATCAGGGCGAAGGCGTTCATCAAATCTCTGACT CTGGCTCATTAAGGCAATATATGCTAGAAAAAAGCAATGTCAATGCGGTGCGCGAGATGAGCGCTTTGATTGGAATCAAC CGCTTTTTGGACATGTATTCTAAAGTGTTAAAAACCCACCAAGACGACATGAACGCCGAAGCGATCAACAAACTCGCCGC AAAAGCTTAA
Upstream 100 bases:
>100_bases TATGGTTATGGTTATCATATTCCCTAAAAAAACCTATTTGGAATAAATCCTGGTTTTTATTTAATTTTTGCTATAATTTT TCTTTTAAAAGGATTCTTGC
Downstream 100 bases:
>100_bases AAACGAATGATTTAGGATTATTTTCAACTTGTGAGTCTGTAAGAATTTCTTTTGTCTCTTTGGCTTGTGAAAAATTTTCA TGCATGCATGTGTTTGCATG
Product: flagellar basal-body rod protein (flgG)
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQTKASAKYLNRNLNRVPILSE IYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTRDGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEI EVNQNGEITFRDNEAPIQAGALALVSFSEPKNLKKIGQNLYTYQGEGVHQISDSGSLRQYMLEKSNVNAVREMSALIGIN RFLDMYSKVLKTHQDDMNAEAINKLAAKA
Sequences:
>Translated_269_residues MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQTKASAKYLNRNLNRVPILSE IYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTRDGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEI EVNQNGEITFRDNEAPIQAGALALVSFSEPKNLKKIGQNLYTYQGEGVHQISDSGSLRQYMLEKSNVNAVREMSALIGIN RFLDMYSKVLKTHQDDMNAEAINKLAAKA >Mature_269_residues MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQTKASAKYLNRNLNRVPILSE IYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTRDGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEI EVNQNGEITFRDNEAPIQAGALALVSFSEPKNLKKIGQNLYTYQGEGVHQISDSGSLRQYMLEKSNVNAVREMSALIGIN RFLDMYSKVLKTHQDDMNAEAINKLAAKA
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=257, Percent_Identity=33.0739299610895, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1787317, Length=278, Percent_Identity=29.136690647482, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 30038; Mature: 30038
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ CCCCEEEECCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCH TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR HHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEE DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG CCCEEECCCCEEEEECCEEEEHHCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCCCC ALALVSFSEPKNLKKIGQNLYTYQGEGVHQISDSGSLRQYMLEKSNVNAVREMSALIGIN EEEEEECCCCHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH RFLDMYSKVLKTHQDDMNAEAINKLAAKA HHHHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ CCCCEEEECCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCH TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR HHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEE DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG CCCEEECCCCEEEEECCEEEEHHCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCCCC ALALVSFSEPKNLKKIGQNLYTYQGEGVHQISDSGSLRQYMLEKSNVNAVREMSALIGIN EEEEEECCCCHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH RFLDMYSKVLKTHQDDMNAEAINKLAAKA HHHHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]