Click here to switch to the map view.

The map label for this gene is 188527126

Identifier: 188527126

GI number: 188527126

Start: 320712

End: 322187

Strand: Reverse

Name: 188527126

Synonym: HPSH_01665

Alternate gene names: NA

Gene position: 322187-320712 (Counterclockwise)

Preceding gene: 188527127

Following gene: 188527125

Centisome position: 20.03

GC content: 39.16

Gene sequence:

>1476_bases
ATGAAAATGATTCTATTCAACCAAAACCCCATGATCACAAAGCTGCTTGAGAGTGTTTCTAAGAAATTAGAATTGTCTAT
GGAAGATTTTAACCGCTATCAAGAGCTATCCACACGCCTTAAAGAAGATCCAGAATGGATTTTGATAGCCGATGATGAAT
GTTTGGAAAAACTAGACCAAGTGGATTGGCTAGAATTAAAAGAGATCATCTCTCAAAATAAAAACAGCGTGTGCATGTAT
AAAAAGGGTCATGAAGCGCAGCCCTTTTTAGAGGGCTTTGAGATGAAAATCAAAAAACCTTTTTTACCCACTGAGGTTTT
AAAAATCCTTCAAAAAAAGCTTGGTTCTAACATGAGCGAGCTAGAGCCTAGCCAGAATTTAGACCCAACTCAAGAAGTTT
TAGAAACCAATTGGGACGAATTAGAAAATTTAGGCGATTTAGAAGCCTTAGTGCAAGAAGAGCCTAACAATGAAGAGCAA
CTGCTCCCCACTTTAAACGATCAAGAAGAAAAAGAAGAGGTTAAAAAAGAGGTTAAAGAAACTCCCCAAGAAGAAAAACC
TAAAGATGATGAAATACAAGAGGGTGAAATTCTCAAAGATGAAGAAGTTTCTAAAGAGTTGGAAACGCAAGAAGAATTAG
AAATCCCTAAAGAAGAAACGCAAGAGCAAGCCAAAGAACAAGAGCCAATCAAAGAAAAAATGCAAGAAATTAAAGAGGAA
AAACAAGGAAAAACGCAAGATTCCCCAAGCGCGCAAGAATTAGAGGCCATGCAAGAATTAGTCAAAGAAATCCAAGAAAA
CTCTAACGGCCAAGAGGATAAAAAAGAAACCCAAGAAAACGCAGAAACCCCACAAGAATTAGAAACCCCACAAGAATTAG
AAACCCCACAAGATGTAGAAACCCCACAAGATGTAGAAACCCCGCAAGAAAAAACGCAAGATGTAGAAACCCCGCAAGAA
AGTGCAGAAACACCGCAAGATGTAGAAACCCCGCAAGAAAAAACGCAAGATGTAGAAACCCCGCAAGAAAGTGCAGAAAC
CCCGCAAGATGTAGAAACACCGCAAGATGTAGAAACCCCGCAAGAAAACGCAAAAACCCCGCAAGAAACACCGCAAGATG
TAGAAACCCCACAAAAAGAAACCCAAGAAAAAAAAGCCCAAGAAGACCATTACGAAAGCATTGAAGACATTCCTGAGCCG
GTGATGGCTCAAGCGATGGGGGAAGCATTGCCCTTTTTGAGTGAAGCCGTTGCAAAAATTCCTAATAATGAGAATGACAC
AGAAACCCCTGAAGAGAGTGTTATCAAAACCCCGCAAGAAAAAGAAGAAAGCGATAAAAATTCCAGCCCCCTAGAATTGC
GCTTGAATTTGCAAGATTTATTAAAAAGCCTCAATCAAGAGTCCTTGAAAAACCTTTTAGAAAACAAGACCTTAAGCATT
AAAATCACTTTAGAGGATAAAAAACCTGATGCATAA

Upstream 100 bases:

>100_bases
CCAACCAAGTGGATTTTTGATTATAATAAAAGATTTAAAAAAAGCGATAAAAATTGATAGGCTTAAAGAAGCGTTTCTTA
TCAAATAAGGAGTCCCTAAA

Downstream 100 bases:

>100_bases
TGATTTTAATTTACTCATCCTTTCAGGCCCTAGCGGAGCGGGTAAAAGCACCCTTACAAAGTATTTGCAAGAAAAAATCC
CAAAAACCCATTTTTCCCTT

Product: poly E-rich protein

Products: NA

Alternate protein names: PolyE-Rich Protein

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKMILFNQNPMITKLLESVSKKLELSMEDFNRYQELSTRLKEDPEWILIADDECLEKLDQVDWLELKEIISQNKNSVCMY
KKGHEAQPFLEGFEMKIKKPFLPTEVLKILQKKLGSNMSELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ
LLPTLNDQEEKEEVKKEVKETPQEEKPKDDEIQEGEILKDEEVSKELETQEELEIPKEETQEQAKEQEPIKEKMQEIKEE
KQGKTQDSPSAQELEAMQELVKEIQENSNGQEDKKETQENAETPQELETPQELETPQDVETPQDVETPQEKTQDVETPQE
SAETPQDVETPQEKTQDVETPQESAETPQDVETPQDVETPQENAKTPQETPQDVETPQKETQEKKAQEDHYESIEDIPEP
VMAQAMGEALPFLSEAVAKIPNNENDTETPEESVIKTPQEKEESDKNSSPLELRLNLQDLLKSLNQESLKNLLENKTLSI
KITLEDKKPDA

Sequences:

>Translated_491_residues
MKMILFNQNPMITKLLESVSKKLELSMEDFNRYQELSTRLKEDPEWILIADDECLEKLDQVDWLELKEIISQNKNSVCMY
KKGHEAQPFLEGFEMKIKKPFLPTEVLKILQKKLGSNMSELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ
LLPTLNDQEEKEEVKKEVKETPQEEKPKDDEIQEGEILKDEEVSKELETQEELEIPKEETQEQAKEQEPIKEKMQEIKEE
KQGKTQDSPSAQELEAMQELVKEIQENSNGQEDKKETQENAETPQELETPQELETPQDVETPQDVETPQEKTQDVETPQE
SAETPQDVETPQEKTQDVETPQESAETPQDVETPQDVETPQENAKTPQETPQDVETPQKETQEKKAQEDHYESIEDIPEP
VMAQAMGEALPFLSEAVAKIPNNENDTETPEESVIKTPQEKEESDKNSSPLELRLNLQDLLKSLNQESLKNLLENKTLSI
KITLEDKKPDA
>Mature_491_residues
MKMILFNQNPMITKLLESVSKKLELSMEDFNRYQELSTRLKEDPEWILIADDECLEKLDQVDWLELKEIISQNKNSVCMY
KKGHEAQPFLEGFEMKIKKPFLPTEVLKILQKKLGSNMSELEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQ
LLPTLNDQEEKEEVKKEVKETPQEEKPKDDEIQEGEILKDEEVSKELETQEELEIPKEETQEQAKEQEPIKEKMQEIKEE
KQGKTQDSPSAQELEAMQELVKEIQENSNGQEDKKETQENAETPQELETPQELETPQDVETPQDVETPQEKTQDVETPQE
SAETPQDVETPQEKTQDVETPQESAETPQDVETPQDVETPQENAKTPQETPQDVETPQKETQEKKAQEDHYESIEDIPEP
VMAQAMGEALPFLSEAVAKIPNNENDTETPEESVIKTPQEKEESDKNSSPLELRLNLQDLLKSLNQESLKNLLENKTLSI
KITLEDKKPDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56566; Mature: 56566

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMILFNQNPMITKLLESVSKKLELSMEDFNRYQELSTRLKEDPEWILIADDECLEKLDQ
CEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHC
VDWLELKEIISQNKNSVCMYKKGHEAQPFLEGFEMKIKKPFLPTEVLKILQKKLGSNMSE
CHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQLLPTLNDQEEKEEVKKEVKE
CCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHH
TPQEEKPKDDEIQEGEILKDEEVSKELETQEELEIPKEETQEQAKEQEPIKEKMQEIKEE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQGKTQDSPSAQELEAMQELVKEIQENSNGQEDKKETQENAETPQELETPQELETPQDVE
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCC
TPQDVETPQEKTQDVETPQESAETPQDVETPQEKTQDVETPQESAETPQDVETPQDVETP
CCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCC
QENAKTPQETPQDVETPQKETQEKKAQEDHYESIEDIPEPVMAQAMGEALPFLSEAVAKI
HHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PNNENDTETPEESVIKTPQEKEESDKNSSPLELRLNLQDLLKSLNQESLKNLLENKTLSI
CCCCCCCCCCHHHHHCCCHHHHHCCCCCCCEEEEECHHHHHHHHCHHHHHHHHCCCCEEE
KITLEDKKPDA
EEEECCCCCCC
>Mature Secondary Structure
MKMILFNQNPMITKLLESVSKKLELSMEDFNRYQELSTRLKEDPEWILIADDECLEKLDQ
CEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHC
VDWLELKEIISQNKNSVCMYKKGHEAQPFLEGFEMKIKKPFLPTEVLKILQKKLGSNMSE
CHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LEPSQNLDPTQEVLETNWDELENLGDLEALVQEEPNNEEQLLPTLNDQEEKEEVKKEVKE
CCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHH
TPQEEKPKDDEIQEGEILKDEEVSKELETQEELEIPKEETQEQAKEQEPIKEKMQEIKEE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQGKTQDSPSAQELEAMQELVKEIQENSNGQEDKKETQENAETPQELETPQELETPQDVE
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCC
TPQDVETPQEKTQDVETPQESAETPQDVETPQEKTQDVETPQESAETPQDVETPQDVETP
CCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCC
QENAKTPQETPQDVETPQKETQEKKAQEDHYESIEDIPEPVMAQAMGEALPFLSEAVAKI
HHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PNNENDTETPEESVIKTPQEKEESDKNSSPLELRLNLQDLLKSLNQESLKNLLENKTLSI
CCCCCCCCCCHHHHHCCCHHHHHCCCCCCCEEEEECHHHHHHHHCHHHHHHHHCCCCEEE
KITLEDKKPDA
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA