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The map label for this gene is yxkA [H]

Identifier: 188527023

GI number: 188527023

Start: 211956

End: 212540

Strand: Reverse

Name: yxkA [H]

Synonym: HPSH_01130

Alternate gene names: 188527023

Gene position: 212540-211956 (Counterclockwise)

Preceding gene: 188527031

Following gene: 188527017

Centisome position: 13.21

GC content: 41.2

Gene sequence:

>585_bases
ATGCAAAATGATTTCAAAGAAAAAGGGCTTAAAATGAAAACTTTTGAAGTAATGATTCAAACCAATTCGCAAGGGTATTT
GGACGCTAAATTTGGCGGTAACGCTCCTAGAGGGTTTCTCAATCCAAACGGCTTACCCACTTATTCGCCTAAAATCTCAT
GGCAAAAAGTAGAAGGCGCTCAAAGCTATGCGTTAGAACTCATCGATCATGACGCTCAAAAAGTGTGTGGCATGCCGTTT
GTCCATTGGGTCGTGGGCAATATTTCTTATAATGTTTTAGAAGAAAACGCTTCCATGATGGATAAAAGGATTGTTCAAGG
GGTCAATTCGCTCACTCAAGGCTTTATCCGTTCTTCTCTCAATGAAAGCGAAAAACAACGCTCCAATCTCAATAACAGCA
CCTATATCGGCCCCATGCCCCCTAATGGCGATCACCATTACTTAATTCAAGTGTATGCCCTAGACATTCCTAAACTCGCC
TTAAAAGCCCCTTTTTTCTTAGGCGATTTGCATGACAAAATGCGCGGGCATATCATCGCCATAGGGAGAAAGGAATTTTT
ATACAAGCAGTTTGTGAGGAAATAA

Upstream 100 bases:

>100_bases
TAACCACTAAAAGTAAATAGCTATTTAATCATTAAAAATGATTATTCTAATACCATGCTCCAAATTAAGATGTGTTTTTA
TGATCATGCTACAATAAAAA

Downstream 100 bases:

>100_bases
ACTGCATGCTTGTAGCTATTCTTTCGCTAAATTGAATTTTTGATACATTTCTAAAATTTTCTTTTCATCTAGCATGCTTT
CTTCAATCCTTGTGCCTATC

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQNDFKEKGLKMKTFEVMIQTNSQGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPF
VHWVVGNISYNVLEENASMMDKRIVQGVNSLTQGFIRSSLNESEKQRSNLNNSTYIGPMPPNGDHHYLIQVYALDIPKLA
LKAPFFLGDLHDKMRGHIIAIGRKEFLYKQFVRK

Sequences:

>Translated_194_residues
MQNDFKEKGLKMKTFEVMIQTNSQGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPF
VHWVVGNISYNVLEENASMMDKRIVQGVNSLTQGFIRSSLNESEKQRSNLNNSTYIGPMPPNGDHHYLIQVYALDIPKLA
LKAPFFLGDLHDKMRGHIIAIGRKEFLYKQFVRK
>Mature_194_residues
MQNDFKEKGLKMKTFEVMIQTNSQGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPF
VHWVVGNISYNVLEENASMMDKRIVQGVNSLTQGFIRSSLNESEKQRSNLNNSTYIGPMPPNGDHHYLIQVYALDIPKLA
LKAPFFLGDLHDKMRGHIIAIGRKEFLYKQFVRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22010; Mature: 22010

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNDFKEKGLKMKTFEVMIQTNSQGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGA
CCCCCHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCH
QSYALELIDHDAQKVCGMPFVHWVVGNISYNVLEENASMMDKRIVQGVNSLTQGFIRSSL
HHHHHHHHHCCHHHHHCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NESEKQRSNLNNSTYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRGHIIA
CHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHCCCCEEE
IGRKEFLYKQFVRK
ECHHHHHHHHHHCC
>Mature Secondary Structure
MQNDFKEKGLKMKTFEVMIQTNSQGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGA
CCCCCHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCH
QSYALELIDHDAQKVCGMPFVHWVVGNISYNVLEENASMMDKRIVQGVNSLTQGFIRSSL
HHHHHHHHHCCHHHHHCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NESEKQRSNLNNSTYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRGHIIA
CHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHCCCCEEE
IGRKEFLYKQFVRK
ECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]