| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527021
Identifier: 188527021
GI number: 188527021
Start: 210802
End: 211098
Strand: Direct
Name: 188527021
Synonym: HPSH_01120
Alternate gene names: NA
Gene position: 210802-211098 (Clockwise)
Preceding gene: 188527020
Following gene: 188527022
Centisome position: 13.11
GC content: 31.31
Gene sequence:
>297_bases ATGGGGTTAAAAAATAAAATCAAGGGTTTTATTAAAGAGAGAATGCCTTTTGTGGTCAGATATGTTCGTAGTTCAAAAGG GGTCAAAAATATTTATGGTGAAATCAATCATGAAATTAAGGAAATGTTAGAGGCTAAAAAACTTCATTCTCTTCAAGAAA AAGCTTTATTCAACCATGACCATCAAGAAAGCGTGTTTTTGGCTATCGCTTCTTTAAATAATGAAAGTTTCATTGAACGC AATAAGAGTATTTATAAAAATAGTTCTTATTATAATTATGGGGGGGGGGGCATTTAG
Upstream 100 bases:
>100_bases CGTTGGATAGGGAAGTTAGGGAGCGTTTTGGAAGTGTAGCGAGAGTGTAGTATAATAAGATTTTGCTTTTCGTAGCGTTT TATTTCAATCAGGAGTTTTT
Downstream 100 bases:
>100_bases AAGATAGGGTTATCCATCCCACTTTAACTCTGCCCAATCCCACGCATTTGGGTTATTTTGACTATGATAAAGAAAGTCAA AACCCTAAAAGCCCTCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MGLKNKIKGFIKERMPFVVRYVRSSKGVKNIYGEINHEIKEMLEAKKLHSLQEKALFNHDHQESVFLAIASLNNESFIER NKSIYKNSSYYNYGGGGI
Sequences:
>Translated_98_residues MGLKNKIKGFIKERMPFVVRYVRSSKGVKNIYGEINHEIKEMLEAKKLHSLQEKALFNHDHQESVFLAIASLNNESFIER NKSIYKNSSYYNYGGGGI >Mature_97_residues GLKNKIKGFIKERMPFVVRYVRSSKGVKNIYGEINHEIKEMLEAKKLHSLQEKALFNHDHQESVFLAIASLNNESFIERN KSIYKNSSYYNYGGGGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11326; Mature: 11195
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKNKIKGFIKERMPFVVRYVRSSKGVKNIYGEINHEIKEMLEAKKLHSLQEKALFNHD CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HQESVFLAIASLNNESFIERNKSIYKNSSYYNYGGGGI CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GLKNKIKGFIKERMPFVVRYVRSSKGVKNIYGEINHEIKEMLEAKKLHSLQEKALFNHD CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HQESVFLAIASLNNESFIERNKSIYKNSSYYNYGGGGI CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA