| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is htpG [H]
Identifier: 188527014
GI number: 188527014
Start: 200943
End: 202808
Strand: Direct
Name: htpG [H]
Synonym: HPSH_01085
Alternate gene names: 188527014
Gene position: 200943-202808 (Clockwise)
Preceding gene: 188527013
Following gene: 188527018
Centisome position: 12.49
GC content: 37.62
Gene sequence:
>1866_bases ATGTCTAATCAAGAATACACCTTCCAAACTGAAATCAACCAGCTTTTGGATTTGATGATCCACTCTTTGTATTCTAATAA AGAGATTTTTTTAAGAGAGTTGATTTCTAACGCGAGCGACGCTTTGGACAAGCTGAATTATTTAATGCTGACTGATGAAA AATTAAAAGGGCTGAATATCACGCCTGGCATTCATTTGAGTTTTGATAGCCAGAAAAAAACCTTAACGATTAAAGATAAT GGTATAGGCATGGATAAAAACGAACTCATTGAGCATCTAGGCACGATCGCTAAATCAGGCACGAAGAGTTTTTTAAGCGC TTTGAGCGGGGATAAGAAAAAAGATAGCGCACTGATTGGCCAATTTGGCGTGGGCTTTTATTCGGCGTTTATGGTAGCGA GTAAGATTGTCGTTCAAACCAAAAAGGTAAATAGCGATCAAGCTTATGCATGGGTGAGCGATGGTAAGGGCAAGTTTGAA ATCAGCGAGTGCGTCAAAGAGGAGCAAGGCACAGAAATCACCCTCTTTTTAAAAGATGAAGATTCTCATTTTGCGAGCCG TTGGGAGATTGATAGCGTTGTTAAAAAGTATTCTGAGCATATCCCTTTCCCTATTTTTTTAACTTACACCGATACGAAAT ACGAGGGCGAAGGAGATAATCAAAAAGAAATTAAAGAAGAAAAATGCGATCAGATCAATCAAGCGAGCGCTCTATGGAAA ATGAATAAGAGCGAGTTGAAAGACAAAGATTACAAAGAGTTTTACCAATCGTTTGCGCATGATAACAGCGAACCTTTGAG CTATATCCATAATAAAGTGGAAGGCTCTTTAGAATACACAACGCTTTTTTACATCCCTAGCAAAGCGCCCTTTGACATGT TTAGGGTGGATTATAAAAGCGGAGTCAAACTTTATGTTAAAAGGGTGTTTATCACTGATGATGACAAAGAATTGTTGCCG TCTTATTTGAGGTTTGTTAAAGGCGTGATTGACAGCGAAGATTTACCCTTGAATGTGAGCCGTGAAATCTTGCAGCAAAA CAAGATTTTAGCCAATATCCGTTCGGCTTCAGTGAAAAAGATTTTAAGCGAGATTGAACGCTTGAGCAAGGATGAAAAAA ATTACCATAAATTCTATGAGCCTTTTGGGAAAGTGTTAAAAGAAGGCTTGTATGGGGATTTTGAAAACAAAGAAAAACTT TTAGAATTGTTAAGATTCTATTCTAAAGACAAAGAAAAGTTGGTTTCTTTAAAAGAATACAAAGAAAATTTAAAAGAAAA TCAAAAAAGCATTTACTACCTTTTAGGCGAAAATTTAGACTTACTAAAGGCGTCCCCGCTTTTAGAAAAATACGCTCAAA AAGGCTATGATGTTTTGTTATTGAGCGATGAAATTGATGCGTTTGTGATGCCAGGCGTGAATGAATACGATAAAACGCCC TTTAAAGACGCTAGCCATAGCGAGAGCCTAAAAGAGCTTGGTTTAGAAGAAATCAACGATGAGGTAAAAGAGCGGTTTAA AGATTTAATGAAAGCGTTTGAAGAAAATCTTAAAGATGAGATTAAAAGCGTAGAGCTTTCTAACCATCTCACTTCAGCGG TGGCTTTAATAGGCGATGAACAAAATGCGATGATGGCTAATTGGATGCGTCAAATGGGCCAAAGCGTGCCTGAAAACAAG AAAACGCTAGAATTAAACCCTAACCATGCGATTTTGCAAAAACTCTTAAAATGCGAAGATAAAGAGCAGTTGAGCGCTTT TATCTGGTTGCTTTATGATGGGGCGAAGCTTTTAGAAAAAGGGGCTTTAAAAGACGCTAAAAGCTTTAACGAACGCCTAA ATAGCGTGCTATTGAAAGCGTTGTAG
Upstream 100 bases:
>100_bases AATTAAACATTCTTTCATGTTACTTTTTAAGCCATGGCATACCCCTTTTAAGCGCGCTTTTATTGTATAATCTTAAAAAT TTTATTAAAGGAAAAGATCA
Downstream 100 bases:
>100_bases GGGATAAAACCCTTTAAGGGTTTGAATAAACGCTTTATAAACCCTTCAAGTGCTAATCTAAAAACGGCAATGAATGGGCA CGATAAAAGCCTTATTATGA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPGIHLSFDSQKKTLTIKDN GIGMDKNELIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVNSDQAYAWVSDGKGKFE ISECVKEEQGTEITLFLKDEDSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKYEGEGDNQKEIKEEKCDQINQASALWK MNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLVSLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP FKDASHSESLKELGLEEINDEVKERFKDLMKAFEENLKDEIKSVELSNHLTSAVALIGDEQNAMMANWMRQMGQSVPENK KTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Sequences:
>Translated_621_residues MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPGIHLSFDSQKKTLTIKDN GIGMDKNELIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVNSDQAYAWVSDGKGKFE ISECVKEEQGTEITLFLKDEDSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKYEGEGDNQKEIKEEKCDQINQASALWK MNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLVSLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP FKDASHSESLKELGLEEINDEVKERFKDLMKAFEENLKDEIKSVELSNHLTSAVALIGDEQNAMMANWMRQMGQSVPENK KTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL >Mature_620_residues SNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPGIHLSFDSQKKTLTIKDNG IGMDKNELIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVNSDQAYAWVSDGKGKFEI SECVKEEQGTEITLFLKDEDSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKYEGEGDNQKEIKEEKCDQINQASALWKM NKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLPS YLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLL ELLRFYSKDKEKLVSLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPF KDASHSESLKELGLEEINDEVKERFKDLMKAFEENLKDEIKSVELSNHLTSAVALIGDEQNAMMANWMRQMGQSVPENKK TLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI20149594, Length=674, Percent_Identity=37.9821958456973, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI155722983, Length=655, Percent_Identity=33.2824427480916, Blast_Score=347, Evalue=1e-95, Organism=Homo sapiens, GI154146191, Length=401, Percent_Identity=35.9102244389027, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI153792590, Length=401, Percent_Identity=35.9102244389027, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI4507677, Length=210, Percent_Identity=47.1428571428571, Blast_Score=178, Evalue=2e-44, Organism=Escherichia coli, GI1786679, Length=635, Percent_Identity=46.7716535433071, Blast_Score=552, Evalue=1e-158, Organism=Caenorhabditis elegans, GI17559162, Length=656, Percent_Identity=37.8048780487805, Blast_Score=406, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17542208, Length=669, Percent_Identity=36.0239162929746, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI115535205, Length=647, Percent_Identity=32.7666151468315, Blast_Score=293, Evalue=3e-79, Organism=Caenorhabditis elegans, GI115535167, Length=438, Percent_Identity=36.3013698630137, Blast_Score=254, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6323840, Length=689, Percent_Identity=37.155297532656, Blast_Score=405, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6325016, Length=682, Percent_Identity=37.5366568914956, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI17647529, Length=643, Percent_Identity=37.1695178849145, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI21357739, Length=632, Percent_Identity=37.1835443037975, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24586016, Length=648, Percent_Identity=33.179012345679, Blast_Score=316, Evalue=4e-86,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 71400; Mature: 71269
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNI CCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC TPGIHLSFDSQKKTLTIKDNGIGMDKNELIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVASKIVVQTKKVNSDQAYAWVSDGKGKFEISECVKEEQGTEITLFLKDE HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECC DSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKYEGEGDNQKEIKEEKCDQINQASALWK CCHHHHHCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLVSLKEY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH KENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCC FKDASHSESLKELGLEEINDEVKERFKDLMKAFEENLKDEIKSVELSNHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNAMMANWMRQMGQSVPENKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEK CHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNI CCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC TPGIHLSFDSQKKTLTIKDNGIGMDKNELIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVASKIVVQTKKVNSDQAYAWVSDGKGKFEISECVKEEQGTEITLFLKDE HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECC DSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKYEGEGDNQKEIKEEKCDQINQASALWK CCHHHHHCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLVSLKEY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH KENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCC FKDASHSESLKELGLEEINDEVKERFKDLMKAFEENLKDEIKSVELSNHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNAMMANWMRQMGQSVPENKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEK CHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA