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The map label for this gene is 188527013

Identifier: 188527013

GI number: 188527013

Start: 199437

End: 200840

Strand: Direct

Name: 188527013

Synonym: HPSH_01080

Alternate gene names: NA

Gene position: 199437-200840 (Clockwise)

Preceding gene: 188527010

Following gene: 188527014

Centisome position: 12.4

GC content: 38.89

Gene sequence:

>1404_bases
TTGTTTTATGGCATAATATCAGACTTCAATAAAAAGGTGTTTGATAAAAGGGTGTTTCATCAAAAAGTTTGGCTAGGGTT
TTTAGCTTTGCATGGGGTTTTTCTCAACGCTTTTGAGTATCAAATCAGCGCGAGAGTGGGATCATTTTCACGCATCGCTT
TCAACCAGTCGGTTATCAATTCAAAAAAAGGGATTTATCCTACAGGGAGTTATGTAACCACTACCGGGGCTTTACAAGTT
GATTCCAGTTTGCTCCCTAAAGGGATTGAAAACCACAAACTGGGTTTTGGGGTGGGGGGCGAAATAGGATCGTTAGCTTA
TGATTCCACGAAGTTTTTGATTGATGAAGCCAACCCTAAGGCGGGGTTTCAGCCAGCGAACTGGTATTATATGGGGCGAT
GGGAGGGCTATTTGATGCAACACAGCCAAAATTGGACCAGAGAGCAAAAGGCGCAAAACGCCAGGCCTTATGTGTTATAC
AATTTGTATTTAGATTATCAATATAAGGATATTTTTGGGATTAAATTAGGGCGTTACCCCTCTAAAGCTTTGTTTTTGAG
CGGGTTTAATCAAGGGTTTGAGCTTTTTTACCGGTGGAAAAAATTTAGGATAGAGTGGTTTAGCACCTTTGGAAGGGCTT
TAGCTAATGAGCAATCCATTAGAGATTTTTACGCTCCTGTCAATTACAAGCAAAAAACCAACTACGGCATGCACAATTTA
AACCTCATTTACGAAAATAAATACATTAGGGTCGTGCCTTTTATTTGGTTTTACCCTAAGAATTTTAACGCTCCTGGATT
TGAAATCACCCATGATACAAAGTCTTATTGGAAATCTGATTGGCGCATCCAAACGACTTTTTACGCATGGTTCCCCCTTT
ATAGCGATTATTTGTCTAAAGATTATTACAGAGCTTCGTTAATAGGGAAAAAAAGCGCGAGTTTGTTTGTGTTTCAAAGG
GTGCATTTTCGATCTTATCGTTTTGGCTGGAGCGTGTATAAGAATTTTGGGAACGGGAGCGCTCAATTAGGCTGGAACGG
CTCACCAGTGGATCCTTTTTATGACACTAAAGATGACACCCCTTATGAAGACGCTTATTCCAATTTTTACAACGCTAATT
CCATGACCATTAACGCTTTTATAGGGAAGAGTATTAAGAATCTTTTGGTGCAATTGTATGGGAAATTGACCTATTCCCCA
AGGGCTGATTCGCAAAGCTTAGGGGTTACTTTTAAATACAACCTTAAAAAACATATCTATTTAATGCTAATGTTTAATGG
CTATCAAATCACGATGCATAAGGGTTATAAGGTAGGGTTTTTTACAAGCGGTTACAACCCTGATTTCGCTCAAACCATTC
AAGATAGAAGCTATTTTATGAGCTCTATGAGTTATCGTTTTTAA

Upstream 100 bases:

>100_bases
CTTAAATCTTAAAATTGAACCCGCTTTTTATAAAAAGGGGGGTCTGTGATTTTATCGTTTTTTTTTTTTCAAAACTATAA
TGAGCGAGCGGCTTGCGAGT

Downstream 100 bases:

>100_bases
AAAATTAAACATTCTTTCATGTTACTTTTTAAGCCATGGCATACCCCTTTTAAGCGCGCTTTTATTGTATAATCTTAAAA
ATTTTATTAAAGGAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD; Outermembrane Protein HofE

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MFYGIISDFNKKVFDKRVFHQKVWLGFLALHGVFLNAFEYQISARVGSFSRIAFNQSVINSKKGIYPTGSYVTTTGALQV
DSSLLPKGIENHKLGFGVGGEIGSLAYDSTKFLIDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLY
NLYLDYQYKDIFGIKLGRYPSKALFLSGFNQGFELFYRWKKFRIEWFSTFGRALANEQSIRDFYAPVNYKQKTNYGMHNL
NLIYENKYIRVVPFIWFYPKNFNAPGFEITHDTKSYWKSDWRIQTTFYAWFPLYSDYLSKDYYRASLIGKKSASLFVFQR
VHFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSMTINAFIGKSIKNLLVQLYGKLTYSP
RADSQSLGVTFKYNLKKHIYLMLMFNGYQITMHKGYKVGFFTSGYNPDFAQTIQDRSYFMSSMSYRF

Sequences:

>Translated_467_residues
MFYGIISDFNKKVFDKRVFHQKVWLGFLALHGVFLNAFEYQISARVGSFSRIAFNQSVINSKKGIYPTGSYVTTTGALQV
DSSLLPKGIENHKLGFGVGGEIGSLAYDSTKFLIDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLY
NLYLDYQYKDIFGIKLGRYPSKALFLSGFNQGFELFYRWKKFRIEWFSTFGRALANEQSIRDFYAPVNYKQKTNYGMHNL
NLIYENKYIRVVPFIWFYPKNFNAPGFEITHDTKSYWKSDWRIQTTFYAWFPLYSDYLSKDYYRASLIGKKSASLFVFQR
VHFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSMTINAFIGKSIKNLLVQLYGKLTYSP
RADSQSLGVTFKYNLKKHIYLMLMFNGYQITMHKGYKVGFFTSGYNPDFAQTIQDRSYFMSSMSYRF
>Mature_467_residues
MFYGIISDFNKKVFDKRVFHQKVWLGFLALHGVFLNAFEYQISARVGSFSRIAFNQSVINSKKGIYPTGSYVTTTGALQV
DSSLLPKGIENHKLGFGVGGEIGSLAYDSTKFLIDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLY
NLYLDYQYKDIFGIKLGRYPSKALFLSGFNQGFELFYRWKKFRIEWFSTFGRALANEQSIRDFYAPVNYKQKTNYGMHNL
NLIYENKYIRVVPFIWFYPKNFNAPGFEITHDTKSYWKSDWRIQTTFYAWFPLYSDYLSKDYYRASLIGKKSASLFVFQR
VHFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSMTINAFIGKSIKNLLVQLYGKLTYSP
RADSQSLGVTFKYNLKKHIYLMLMFNGYQITMHKGYKVGFFTSGYNPDFAQTIQDRSYFMSSMSYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54784; Mature: 54784

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYGIISDFNKKVFDKRVFHQKVWLGFLALHGVFLNAFEYQISARVGSFSRIAFNQSVIN
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECHHHHC
SKKGIYPTGSYVTTTGALQVDSSLLPKGIENHKLGFGVGGEIGSLAYDSTKFLIDEANPK
CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCC
AGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLGRYP
CCCCCCCEEEEEEECEEEEECCCCCCHHHHHCCCCCEEEEEEEEEEEECEEEEEEECCCC
SKALFLSGFNQGFELFYRWKKFRIEWFSTFGRALANEQSIRDFYAPVNYKQKTNYGMHNL
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEE
NLIYENKYIRVVPFIWFYPKNFNAPGFEITHDTKSYWKSDWRIQTTFYAWFPLYSDYLSK
EEEEECCEEEEEEEEEEECCCCCCCCEEEECCCHHHHCCCCEEEEEEEEEHHHHHHHHCC
DYYRASLIGKKSASLFVFQRVHFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDT
CCEEEEECCCCCCEEEEEEEHHHHHEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
PYEDAYSNFYNANSMTINAFIGKSIKNLLVQLYGKLTYSPRADSQSLGVTFKYNLKKHIY
CHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCEECCCCCCCCCCCEEEEEECCEEEE
LMLMFNGYQITMHKGYKVGFFTSGYNPDFAQTIQDRSYFMSSMSYRF
EEEEECCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFYGIISDFNKKVFDKRVFHQKVWLGFLALHGVFLNAFEYQISARVGSFSRIAFNQSVIN
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECHHHHC
SKKGIYPTGSYVTTTGALQVDSSLLPKGIENHKLGFGVGGEIGSLAYDSTKFLIDEANPK
CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCC
AGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLGRYP
CCCCCCCEEEEEEECEEEEECCCCCCHHHHHCCCCCEEEEEEEEEEEECEEEEEEECCCC
SKALFLSGFNQGFELFYRWKKFRIEWFSTFGRALANEQSIRDFYAPVNYKQKTNYGMHNL
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEE
NLIYENKYIRVVPFIWFYPKNFNAPGFEITHDTKSYWKSDWRIQTTFYAWFPLYSDYLSK
EEEEECCEEEEEEEEEEECCCCCCCCEEEECCCHHHHCCCCEEEEEEEEEHHHHHHHHCC
DYYRASLIGKKSASLFVFQRVHFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDT
CCEEEEECCCCCCEEEEEEEHHHHHEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
PYEDAYSNFYNANSMTINAFIGKSIKNLLVQLYGKLTYSPRADSQSLGVTFKYNLKKHIY
CHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCEECCCCCCCCCCCEEEEEECCEEEE
LMLMFNGYQITMHKGYKVGFFTSGYNPDFAQTIQDRSYFMSSMSYRF
EEEEECCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA