Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527008

Identifier: 188527008

GI number: 188527008

Start: 192802

End: 193104

Strand: Direct

Name: 188527008

Synonym: HPSH_01040

Alternate gene names: NA

Gene position: 192802-193104 (Clockwise)

Preceding gene: 188527007

Following gene: 188527010

Centisome position: 11.99

GC content: 39.93

Gene sequence:

>303_bases
ATGAAAAAGATGATTTTTTTATTTTTAGTGGTGTTGGGGGGTTTAGAAGCGCAAAGCACTTATTGCAGCGATCATTGCGA
AGGCACGCCAGATAGCCGTATCCCTCCTATGGGGTTTTATTTTAGTTTTGCGCATTCAGTGAAATATTACTTGCAAGATC
CGCAAGAGCGCGATCACAAGCTTGAAAAATGCCACAAAGCCTTTGATTCGACTCTTAAGGTTAATTTTATTACGAAGTCT
TTTAAAAAGGATTGCAAGCATGCGCAAATGGCTTTAGAGCAGTCCCAACAAAAAACTCCATGA

Upstream 100 bases:

>100_bases
GGGCGATTTAATGCTTTTAGATGCTTTTGGTGGGGGATTGACTTGGGGTTCAGCGTTGGTGTATTTTGGAGGAAGTTAGG
AAAAGATTGAAGGAGTATTG

Downstream 100 bases:

>100_bases
GAGGTTTTGGTCGCTTTGTGGCAAAACTCTTTTTAAATTTTATCCCACTAGCGCGAAAAACTCTCTCCTTTAGGGCGTAA
GATGCAAGCACATAGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS
FKKDCKHAQMALEQSQQKTP

Sequences:

>Translated_100_residues
MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS
FKKDCKHAQMALEQSQQKTP
>Mature_100_residues
MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHKLEKCHKAFDSTLKVNFITKS
FKKDCKHAQMALEQSQQKTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11581; Mature: 11581

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHK
CHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
LEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQSQQKTP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKMIFLFLVVLGGLEAQSTYCSDHCEGTPDSRIPPMGFYFSFAHSVKYYLQDPQERDHK
CHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
LEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQSQQKTP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA