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The map label for this gene is yqhA [C]

Identifier: 188526994

GI number: 188526994

Start: 179931

End: 180467

Strand: Direct

Name: yqhA [C]

Synonym: HPSH_00970

Alternate gene names: 188526994

Gene position: 179931-180467 (Clockwise)

Preceding gene: 188526991

Following gene: 188526999

Centisome position: 11.19

GC content: 40.6

Gene sequence:

>537_bases
ATGTTAGAAAAATTGATTGAAAGAGTGTTGTTTGCCACTCGTTGGTTGCTGGCCCCTTTATGCATTGCCATGTCGTTAGT
GCTGGTGGTTTTAGGCTATGTGTTCATGAAAGAGTTGTGGCACATGCTAAGCCACCTAGACACGATCAGCGAAACGGATT
TGGTTTTATCAGCCTTAGGATTAGTGGATTTGTTGTTTATGGCCGGACTTGTTTTAATGGTGTTGCTCGCTAGTTATGAA
AGCTTTGTTTCTAAATTAGACAAGGTGGATGCTAGTGAAATCACTTGGCTAAAGCACACGGATTTTAACGCTTTAAAATT
AAAGGTTTCACTCTCCATTGTAGCCATTTCGGCGATTTTCTTGCTCAAACGCTATATGAGTTTAGAAGATGTTTTATCCA
GCATTCCTAAGGATACGCCCCTATCGCATAACCCCATTTTTTGGCAAGTGGTGATCCATTTGGTGTTTGTGTGTTCAGCG
CTTTTAGCCGCCGTTACCAATAATATCGCTTTTTCGCAAAATAATAAAGGGCATTAA

Upstream 100 bases:

>100_bases
TGAAATTTCACTCCATCAAGGCGTTCTATTAGCCACTCGGGGCGTTTTATTAGCTATAATCAAGGGTTTAAAAAGACATA
ATCCAAAAAAGAGTTTGAAT

Downstream 100 bases:

>100_bases
AAATTTTAAAGCTCTCTTTCAGGAAGGACTTTAGACCATTCTTTAATCAAGCGTAAAAAGAAGGAAGTGTCAGGCGAAGT
TTTTTCATGGATTAAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNNKGH

Sequences:

>Translated_178_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNNKGH
>Mature_178_residues
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYE
SFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSA
LLAAVTNNIAFSQNNKGH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=164, Percent_Identity=40.8536585365854, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y970_HELPS (B2US19)

Other databases:

- EMBL:   CP001072
- RefSeq:   YP_001909681.1
- GeneID:   6296364
- GenomeReviews:   CP001072_GR
- KEGG:   hps:HPSH_00970
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 19929; Mature: 19929

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f941f5c)-; HASH(0x2191eae4)-; HASH(0x2111dff8)-; HASH(0x2195d044)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLAAVTNNIAFSQNNKGH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLAAVTNNIAFSQNNKGH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA