Click here to switch to the map view.

The map label for this gene is 188526974

Identifier: 188526974

GI number: 188526974

Start: 161569

End: 162288

Strand: Reverse

Name: 188526974

Synonym: HPSH_00855

Alternate gene names: NA

Gene position: 162288-161569 (Counterclockwise)

Preceding gene: 188526975

Following gene: 188526973

Centisome position: 10.09

GC content: 40.28

Gene sequence:

>720_bases
ATGACACAAGAAGAATTAGACGCTTTGATGAATGGTGGCGATTTAGAAAATTTGGAAGCCCTAGAGGCTAAAGAAGAAAC
TAAAGAGGAGCCTAAAGAGGTTAAAGAAAATTCCAATCATAGTGAAAAAATGACCGTCAAAAAAGAAGACGCTGAAAAAT
ACGGCAAGATTAGCCCTAACGAATGGCCTCCCCCTCCCCCCACTGAAGAGCATAAAGTCGTGCATCAATTAGATGATGTT
ACAAGAGATTCTGAAGTGAAAGCCACGCAAATTTTTGATCAGTTGGATTTGATCGGGGCTAGCGCTGAAAAAATCTCTAA
AATGGTTAAAAAAATCCAAGAACCTTTGCAAAAACACCAAGAAATTTTTGACAATTTGCATGGCCATTTCCCCAATATTG
AATCTTTTAAAACCGCACTCAATGAGCAACAAGAAATCCTAAACGCCCTTAAAAGCATTGAAGAAGAAGCCACTAATTGC
TCTGATAGCTCCATGCAAGCGATGGATATTATGCAGTTTCAAGACATTCACCGCCAAAAAATTGAACGAGTGGTCAATGT
CATGCGAGCGCTCAGCCAATACATGAATTCGCTTTTTGAAGGCAAAATTGATGATTCTAAGCGCGTGAGTTCAGCGACTT
ATATCACCGGCGATGACGATAAAGATTTAGCCAGCGCGGATGATATTGAAGCTTTGATCGCTTCTTTTGGAGCCAAGTAG

Upstream 100 bases:

>100_bases
AAGGCGTTTTGATTGCTAAAGCTTAAGTGCGCTAAAATGACAGCCAATAAATTATGGTTACTATAAAACGCTTTTTAAAA
CCAATTGGCAAGGAACAACA

Downstream 100 bases:

>100_bases
TTTTGAACCAAGTTGAATTACTCTCTCCAGCCGGTAATTTAAAAAAACTTAAAATCGCTCTCAACTATGGGGCTGATGCG
GTTTATGGGGGAGTGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTQEELDALMNGGDLENLEALEAKEETKEEPKEVKENSNHSEKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDV
TRDSEVKATQIFDQLDLIGASAEKISKMVKKIQEPLQKHQEIFDNLHGHFPNIESFKTALNEQQEILNALKSIEEEATNC
SDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATYITGDDDKDLASADDIEALIASFGAK

Sequences:

>Translated_239_residues
MTQEELDALMNGGDLENLEALEAKEETKEEPKEVKENSNHSEKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDV
TRDSEVKATQIFDQLDLIGASAEKISKMVKKIQEPLQKHQEIFDNLHGHFPNIESFKTALNEQQEILNALKSIEEEATNC
SDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATYITGDDDKDLASADDIEALIASFGAK
>Mature_238_residues
TQEELDALMNGGDLENLEALEAKEETKEEPKEVKENSNHSEKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDVT
RDSEVKATQIFDQLDLIGASAEKISKMVKKIQEPLQKHQEIFDNLHGHFPNIESFKTALNEQQEILNALKSIEEEATNCS
DSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATYITGDDDKDLASADDIEALIASFGAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27048; Mature: 26917

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEELDALMNGGDLENLEALEAKEETKEEPKEVKENSNHSEKMTVKKEDAEKYGKISPN
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
EWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKISKMVKKIQEPLQKHQ
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EIFDNLHGHFPNIESFKTALNEQQEILNALKSIEEEATNCSDSSMQAMDIMQFQDIHRQK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IERVVNVMRALSQYMNSLFEGKIDDSKRVSSATYITGDDDKDLASADDIEALIASFGAK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQEELDALMNGGDLENLEALEAKEETKEEPKEVKENSNHSEKMTVKKEDAEKYGKISPN
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
EWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKISKMVKKIQEPLQKHQ
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EIFDNLHGHFPNIESFKTALNEQQEILNALKSIEEEATNCSDSSMQAMDIMQFQDIHRQK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IERVVNVMRALSQYMNSLFEGKIDDSKRVSSATYITGDDDKDLASADDIEALIASFGAK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA