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The map label for this gene is recA

Identifier: 188526958

GI number: 188526958

Start: 147929

End: 148972

Strand: Direct

Name: recA

Synonym: HPSH_00775

Alternate gene names: 188526958

Gene position: 147929-148972 (Clockwise)

Preceding gene: 188526956

Following gene: 188526959

Centisome position: 9.2

GC content: 44.06

Gene sequence:

>1044_bases
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTGGCGATCAAACAAATTGATAAGATTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCTAAGAG
GCTAGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAGATCACCGGTGTTTTGCACAAGATGAA
CACCACTCTCATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCGGCTTTAAAACAAAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCACCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GTTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTATTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGCATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG

Upstream 100 bases:

>100_bases
AAAGTAAAATCCTTTTGTGATAGGGTAAGTCCTTTTATTATAATAGATTTTAGGCTAGGATTTGATAGAATAAACAAATC
AAATTCAATAAGGTAATTTA

Downstream 100 bases:

>100_bases
AAAGGATTTTGATGCTAACCATTAAAGATGTTCATGCTTTAGAAGTGATGGATAGTAGGGGCAATCCTACCATTCAAGCC
AGCGTGATTTTAAGCGATAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Sequences:

>Translated_347_residues
MAIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
>Mature_346_residues
AIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHII
AECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMG
DQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHIG
NRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANEI
TLKIKESIGSNEEIMPLPDEPLEEME

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=337, Percent_Identity=61.7210682492582, Blast_Score=437, Evalue=1e-124,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37684; Mature: 37553

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKG
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCC
RIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQP
CEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCHHHEEEECC
DTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKIT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
HHHHHHCCEEEEEEEHHHHHEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCHHHH
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
CCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECCHHH
GQGRENAKALLKEDKALANEITLKIKESIGSNEEIMPLPDEPLEEME
CCCHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCEECCCCCHHHHCC
>Mature Secondary Structure 
AIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKG
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCC
RIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQP
CEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCHHHEEEECC
DTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKIT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
HHHHHHCCEEEEEEEHHHHHEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCHHHH
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
CCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECCHHH
GQGRENAKALLKEDKALANEITLKIKESIGSNEEIMPLPDEPLEEME
CCCHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA