| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is bcp [H]
Identifier: 188526940
GI number: 188526940
Start: 131829
End: 132287
Strand: Reverse
Name: bcp [H]
Synonym: HPSH_00685
Alternate gene names: 188526940
Gene position: 132287-131829 (Counterclockwise)
Preceding gene: 188526941
Following gene: 188526936
Centisome position: 8.22
GC content: 40.52
Gene sequence:
>459_bases ATGGAAAAATTAGAAGTGGGGCAATTAGCCCCTGATTTCAGGTTGAAAAACAGCGATGGCGTAGAGATTTCTTTAAAAGA TTTGCTCCATAAAAAAGTGGTTCTGTATTTCTACCCTAAAGACAACACCCCCGGATGCACTCTAGAAGCCAAAGACTTTA GCGATCTGTTTAGTGAATTTGAAAAGAAAAACGCTGTTGTCGTAGGCGTAAGCCCTGATAACGCCCAATCGCACCAAAAA TTTATCAGCCAATGCTCTTTGAATGTGATTTTGCTCTGCGATGAAGATAAAAAAGCCGCCAATCTTTACAAAGCTTATGG CAAACGCATGCTTTATGGGAAAGAGCATTTGGGGATTATCCGCTCCACTTTCATTATCAACACGCAGGGCGTTTTAGAAA AATGCTTCTACAATGTCAAAGCGAAAGACCATGCTCAAAAGGTTTTAGAGAGTTTGTAG
Upstream 100 bases:
>100_bases TATTGGCGGGCCTAGCCGGACAGCCGATATTGAATTAAAAACCGTTTTTGGGGTGCATGGGCCTCAAAAAGTCGCTATCA TTCTCTATTAAAGGATAAGG
Downstream 100 bases:
>100_bases TTTAACTCTCTAGCTTTCGCCCGTTTTAATTTGAGATTTTTAGCCATTCTCTCACTTTTAAAAAATGTTTTTTTAAGTTT TGTTTGATAACAAACTTCAT
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSDLFSEFEKKNAVVVGVSPDNAQSHQK FISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKDHAQKVLESL
Sequences:
>Translated_152_residues MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSDLFSEFEKKNAVVVGVSPDNAQSHQK FISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKDHAQKVLESL >Mature_152_residues MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSDLFSEFEKKNAVVVGVSPDNAQSHQK FISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYNVKAKDHAQKVLESL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=152, Percent_Identity=35.5263157894737, Blast_Score=108, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6322180, Length=127, Percent_Identity=37.7952755905512, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17204; Mature: 17204
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSDLFSEF CCCCCCCCCCCCCEECCCCCCEEEHHHHHCCEEEEEEEECCCCCCCEEECCCHHHHHHHH EKKNAVVVGVSPDNAQSHQKFISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGII HHCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH RSTFIINTQGVLEKCFYNVKAKDHAQKVLESL HHHEEEECHHHHHHHHHCCCCHHHHHHHHHHC >Mature Secondary Structure MEKLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSDLFSEF CCCCCCCCCCCCCEECCCCCCEEEHHHHHCCEEEEEEEECCCCCCCEEECCCHHHHHHHH EKKNAVVVGVSPDNAQSHQKFISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGII HHCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH RSTFIINTQGVLEKCFYNVKAKDHAQKVLESL HHHEEEECHHHHHHHHHCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]