| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ykgG [C]
Identifier: 188526941
GI number: 188526941
Start: 132297
End: 132932
Strand: Reverse
Name: ykgG [C]
Synonym: HPSH_00690
Alternate gene names: 188526941
Gene position: 132932-132297 (Counterclockwise)
Preceding gene: 188526942
Following gene: 188526940
Centisome position: 8.26
GC content: 39.31
Gene sequence:
>636_bases ATGAGTAAAGAGCTTATTTTGAACCGCATTAAAGAAGCCAGAGCCAAGCATGCCATTCAGGGAGCAAACCCTGCTTACAG GAATATCATTAAAGTGGAGTTTGAAGACTTGGTGGAAGAATACAAGCATTTCCAAGTGTTGAATAAAGCTGAAGTCATTG AAAGCGCTAAAGAAAATTTAGAGCAAGCAATTTTAAAGGCTTTAGAAAATTTTAAAAGCAAAAAAGTCTTACACTCTACA GATTTGAATTTGAATTTTGAAGCGTTTAAGGATTTTACTTTACAGCCCTATGATAAAGAAATTGAAGCGATGCGTGAAGA GTTGTTTGAGATTGATACGGCTTTATTGCATGGGGTTTGTGGGATTTCAAGCTTGGGCATGATTGGGGCGGTTTCTTCGC ATGCAAGCCCAAGGTTGCTTTCACTCATCACCCTTAATTGCATCATCTTATTGAAAAAAGAATCCATTGTGCGCAATTTG AGTGAAGGCGTGCAAGCTTTAAAAAACCAGAGTAAAAACGGCGTATTACCCACAAACATGCTCCTTATTGGCGGGCCTAG CCGGACAGCCGATATTGAATTAAAAACCGTTTTTGGGGTGCATGGGCCTCAAAAAGTCGCTATCATTCTCTATTAA
Upstream 100 bases:
>100_bases CCCATACTGCCTTTAGTCAAAGAGTGGGCGAGCGTGAGAACCTTACCCAATATGGACACAAGCTTGCATGCAAAAGTCCA GCATTTAGAAGGGGTGATTT
Downstream 100 bases:
>100_bases AGGATAAGGATGGAAAAATTAGAAGTGGGGCAATTAGCCCCTGATTTCAGGTTGAAAAACAGCGATGGCGTAGAGATTTC TTTAAAAGATTTGCTCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHST DLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNL SEGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY
Sequences:
>Translated_211_residues MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHST DLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNL SEGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY >Mature_210_residues SKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHSTD LNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLS EGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 23537; Mature: 23406
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQAILKALENFKSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVC HHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLSEGVQALKNQSKNGVLPTNM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LLIGGPSRTADIELKTVFGVHGPQKVAIILY EEEECCCCCCCEEEEEEECCCCCCEEEEEEC >Mature Secondary Structure SKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQAILKALENFKSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVC HHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLSEGVQALKNQSKNGVLPTNM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LLIGGPSRTADIELKTVFGVHGPQKVAIILY EEEECCCCCCCEEEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]