Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is ykgG [C]

Identifier: 188526941

GI number: 188526941

Start: 132297

End: 132932

Strand: Reverse

Name: ykgG [C]

Synonym: HPSH_00690

Alternate gene names: 188526941

Gene position: 132932-132297 (Counterclockwise)

Preceding gene: 188526942

Following gene: 188526940

Centisome position: 8.26

GC content: 39.31

Gene sequence:

>636_bases
ATGAGTAAAGAGCTTATTTTGAACCGCATTAAAGAAGCCAGAGCCAAGCATGCCATTCAGGGAGCAAACCCTGCTTACAG
GAATATCATTAAAGTGGAGTTTGAAGACTTGGTGGAAGAATACAAGCATTTCCAAGTGTTGAATAAAGCTGAAGTCATTG
AAAGCGCTAAAGAAAATTTAGAGCAAGCAATTTTAAAGGCTTTAGAAAATTTTAAAAGCAAAAAAGTCTTACACTCTACA
GATTTGAATTTGAATTTTGAAGCGTTTAAGGATTTTACTTTACAGCCCTATGATAAAGAAATTGAAGCGATGCGTGAAGA
GTTGTTTGAGATTGATACGGCTTTATTGCATGGGGTTTGTGGGATTTCAAGCTTGGGCATGATTGGGGCGGTTTCTTCGC
ATGCAAGCCCAAGGTTGCTTTCACTCATCACCCTTAATTGCATCATCTTATTGAAAAAAGAATCCATTGTGCGCAATTTG
AGTGAAGGCGTGCAAGCTTTAAAAAACCAGAGTAAAAACGGCGTATTACCCACAAACATGCTCCTTATTGGCGGGCCTAG
CCGGACAGCCGATATTGAATTAAAAACCGTTTTTGGGGTGCATGGGCCTCAAAAAGTCGCTATCATTCTCTATTAA

Upstream 100 bases:

>100_bases
CCCATACTGCCTTTAGTCAAAGAGTGGGCGAGCGTGAGAACCTTACCCAATATGGACACAAGCTTGCATGCAAAAGTCCA
GCATTTAGAAGGGGTGATTT

Downstream 100 bases:

>100_bases
AGGATAAGGATGGAAAAATTAGAAGTGGGGCAATTAGCCCCTGATTTCAGGTTGAAAAACAGCGATGGCGTAGAGATTTC
TTTAAAAGATTTGCTCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHST
DLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNL
SEGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY

Sequences:

>Translated_211_residues
MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHST
DLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNL
SEGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY
>Mature_210_residues
SKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENLEQAILKALENFKSKKVLHSTD
LNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLS
EGVQALKNQSKNGVLPTNMLLIGGPSRTADIELKTVFGVHGPQKVAIILY

Specific function: Unknown

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 23537; Mature: 23406

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAILKALENFKSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVC
HHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLSEGVQALKNQSKNGVLPTNM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LLIGGPSRTADIELKTVFGVHGPQKVAIILY
EEEECCCCCCCEEEEEEECCCCCCEEEEEEC
>Mature Secondary Structure 
SKELILNRIKEARAKHAIQGANPAYRNIIKVEFEDLVEEYKHFQVLNKAEVIESAKENL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAILKALENFKSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVC
HHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLSEGVQALKNQSKNGVLPTNM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LLIGGPSRTADIELKTVFGVHGPQKVAIILY
EEEECCCCCCCEEEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]